Research Article
Genome-Wide Identification, Characterization, and Expression Analysis of the Grapevine Superoxide Dismutase (SOD) Family
Table 1
Chromosome location, subcellular prediction, and physicochemical properties of grape SOD proteins.
| | Gene name | Gene ID | ORF length | Chromosomal localization | Molecular weight | Theoretical pI | Aliphatic index | Grand average of hydropathicity (GRAVY) | Subcellular prediction |
| | VvCSD1 | VIT_202s0025g04830.1 | 969 | chr2(4357308 4364558) | 33844.25 | 5.66 | 88.66 | 0.007 | Cytoplasmic | | VvCSD2 | VIT_206s0061g00750.1 | 666 | chr6(18276905 18281206) | 22537.5 | 5.87 | 92.22 | 0.067 | Cytoplasmic | | VvCSD3 | VIT_208s0007g07280.1 | 471 | chr8(20888649 20892112) | 15786.74 | 7.19 | 83.78 | -0.164 | Cytoplasmic | | VvCSD4 | VIT_214s0030g00830.1 | 381 | chr14(5076284 5079112) | 12926.4 | 5.33 | 81.19 | -0.202 | Cytoplasmic | | VvCSD5 | VIT_214s0030g00950.1 | 351 | chr14(5248285 5250067) | 12149.69 | 4.93 | 84.83 | 0.157 | Cytoplasmic | | VvCSD6 | VIT_214s0036g01320.1 | 240 | chr14(12383065 12384913) | 8594.7 | 5.81 | 83.67 | -0.394 | Cytoplasmic | | VvMSD1 | VIT_206s0004g07950.1 | 687 | chr6(8686646 8687855) | 25615.29 | 7.14 | 94.56 | -0.358 | Mitochondrial | | VvMSD2 | VIT_213s0067g02990.1 | 852 | chr13(1602822 1606910) | 31456.18 | 9.29 | 86.08 | -0.364 | Mitochondrial | | VvFSD1 | VIT_210s0042g00100.1 | 990 | chr10(12756538 12763591) | 37779.23 | 8.62 | 77.11 | -0.522 | Chloroplast | | VvFSD2 | VIT_216s0013g00260.1 | 681 | chr16(5200339 5206132) | 25268.79 | 8.48 | 83.76 | -0.375 | Chloroplast |
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