Analysis of lncRNA, miRNA, and mRNA Expression Profiling in Type I IFN and Type II IFN Overexpressed in Porcine Alveolar Macrophages

Figure 2

Identification and classification of lncRNAs IFN overexpressing 3D4/21 cells. (a) Venn diagrams were constructed for coding potential analysis based on strict standards. The lncRNA coding potential was analyzed using three tools (CPC, CNCI, and PFAM). Those shared by the three analysis tools at the same time were designated as candidate lncRNAs for subsequent analysis. (b) Classification of lncRNAs in the 3D4/21 cell. The lncRNAs identified in this study comprised of 39% large intergenomic noncoding RNA (lincRNA), 17.5% antisense lncRNA, and 43.4% intronic lncRNA.

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