Research Article
Differential Expression and PAH Degradation: What Burkholderia vietnamiensis G4 Can Tell Us?
Table 1
Genes significantly expressed in the experimental group exposed to benzo(a)pyrene.
| | UniProtKB accession | NCBI old locus Tag | Coordinates | Gene length | Gene name | Product description | Significant in BAP |
| | A4JK62 | Bcep1808_3680 | 427848..428741(-−) | 894 | prpB | 2-Methylisocitrate lyase | Yes | | A4JAP4 | Bcep1808_0334 | 378768..379043(+) | 276 | rpsS | 30S ribosomal protein S19 | Yes | | A4JJM7 | Bcep1808_3492 | 203642..205642(−) | 2001 | | 3-Methylcrotonoyl-CoA carboxylase subunit alpha | Yes | | A4JDT5 | Bcep1808_1430 | 1537771..1538475(+) | 705 | | 3-Oxoacid CoA-transferase subunit A | Yes | | A4JAL3 | Bcep1808_0303 | 336630..337727(−) | 1098 | hppD | 4-Hydroxyphenylpyruvate dioxygenase | Yes | | A4JBB7 | Bcep1808_0558 | 614619..614882(+) | 264 | rpmA | 50S ribosomal protein L27 | Yes | | A4JQF7 | Bcep1808_5572 | 122728..123519(+) | 792 | | ABC transporter related | Yes | | A4JA13 | Bcep1808_0093 | 100965..101744(+) | 780 | | ABC transporter-like protein | Yes | | A4JA20 | Bcep1808_0100 | 109204..110988(+) | 1785 | | ABC transporter-like protein | Yes | | A4JQ98 | Bcep1808_5507 | 63088..64278(+) | 1191 | | Acetyl-CoA acetyltransferase | Yes | | A4JK60 | Bcep1808_3678 | 423951..426545(−-) | 2595 | | Aconitate hydratase | Yes | | A4JJ73 | Bcep1808_3337 | 29534..30667(−) | 1134 | | Acyl-CoA dehydrogenase | Yes | | A4JTS0 | Bcep1808_6786 | 182448..183836(−) | 1389 | | Aldehyde dehydrogenase | Yes | | A4JKD6 | Bcep1808_3756 | 501291..502235(+) | 945 | | aldo/keto reductase | Yes | | A4JJ72 | Bcep1808_3336 | 27598..29310(-) | 1713 | | AMP-dependent synthetase/ligase | Yes | | A4JQ96 | Bcep1808_5505 | 60596..62263(+) | 1668 | | AMP-dependent synthetase/ligase | Yes | | A4JCX9 | Bcep1808_1121 | 1218744..1219214(+) | 471 | | AsnC family transcriptional regulator | Yes | | A4JB78 | Bcep1808_0519 | 561462..562664(−) | 1203 | | Beta-ketoadipyl CoA thiolase | Yes | | A4JJK6 | Bcep1808_3471 | 173048..173944(−) | 897 | | Binding-protein-dependent transport system inner membrane protein | Yes | | A4JK86 | Bcep1808_3704 | 454654..455556(−) | 903 | | Binding-protein-dependent transport system inner membrane protein | Yes | | A4JK87 | Bcep1808_3705 | 455570..456508(−) | 939 | | Binding-protein-dependent transport system inner membrane protein | Yes |
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