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| Name and link | Description |
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| MaizeGDB http://www.maizegdb.org/ | A community database for biological information about the crop plant Zea mays ssp. mays. Genetic, genomic, sequence, gene product, functional characterization, literature reference, and person/organization contact information are among the data types accessible (see Section 9 for further details) |
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| MAGI http://magi.plantgenomics.iastate.edu/ | Maize assembled genomic island (MAGI) reports the results of a maize genome assembly project being conducted by the Aluru, Ashlock and Schnable research groups |
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| Gramene http://www.gramene.org/ | A resource for comparative grass genomics including: genomes, protein, maps, markers, traits, genetics diversity, biochemical pathway, literature, and so forth |
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| Maizesequence http://www.maizesequence.org/index.html | Provides sequence and annotation of the Zea mays ssp. Mays genome resulting from the maize genome sequencing project |
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| mtmDB http://mtm.cshl.edu/ | A transposon library in maize for the purpose of targeted selection of gene knockouts |
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| Maize tilling http://genome.purdue.edu/maizetilling/ | A website for maize tilling project that collects and distributes maize tilling mutant and seeds |
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| NCBI Maize http://www.ncbi.nlm.nih.gov/mapview/map_search.cgi?taxid=4577 | Provides all of the accessions from Zea mays including: genomics, cDNA, EST, GSS, HTG sequences |
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| SAM http://sam.truman.edu/ | A database for maize shoot apical meristem expression |
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| Helitons http://genomecluster.secs.oakland.edu/helitrons/ | A catalog of discovered helitrons |
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| Grassius http://www.grassius.org/ | Provides a collection of databases for transcription factors, promoters and cis-regulatory elements across the grasses, including maize, sugarcane, sorghum, and rice |
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| Panzea http://www.panzea.org/ | A database for molecular and functional diversity of the maize genome |
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| MaizePLEX http://www.plexdb.org/plex.php?database=Corn | A miame-compliant and plant ontology enhanced expression database for maize microarray data |
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| TIGR Maize http://maize.tigr.org/ | Provides links to the NSF-funded consortium for maize genomics project and includes sequence, assembly, and annotation data, and links to the maize gene index |
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| MaizecDNA http://www.maizecdna.org/ | Released 30000 FLcDNA from diverse B73 tissues samples |
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| ZmGDB http://www.plantgdb.org/ZmGDB/ | Provides a convenient sequence-centered genome view for Zea mays, with a narrow focus on gene structure annotation |
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| PML http://chloroplast.uoregon.edu/ | A genetic resource in maize, that is, tailored for studies of chloroplast biogenesis |
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| VPhenoDBS http://medbio.cecs.missouri.edu/VPhenoDBS/ | Web-based visual phenotypic information management system to allow simultaneously query phenotype data by image example, sequence, ontology, genetic and physical map information, and text annotation |
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