Significance Test and Genome Selection in Bayesian Shrinkage Analysis

Table 1

QTL parameters used in the simulation experiment.

QTL	Position	Marker	Effect	Prop-G	Prop-P
1	50	11	4.47	0.1505	0.1308
2	125	26	3.16	0.0752	0.0654
3	205	42	−2.24	0.0378	0.0328
4	235	48	−1.58	0.0188	0.0163
5	355	72	2.24	0.0378	0.0328
6	360	73	3.16	0.0752	0.0654
7	610	123	1.10	0.0091	0.0079
8	630	127	−1.10	0.0091	0.0079
9	800	161	0.77	0.0045	0.0039
10	900	181	1.73	0.0225	0.0196
11	905	182	3.81	0.1093	0.0950
12	920	185	2.25	0.0381	0.0331
13	1100	221	−1.30	0.0127	0.0111
14	1210	243	−1.00	0.0075	0.0065
15	1305	262	−2.24	0.0378	0.0328
16	1335	268	1.58	0.0188	0.0163
17	1345	270	1.00	0.0075	0.0065
18	1365	274	−1.73	0.0225	0.0196
19	1800	361	0.71	0.0038	0.0033
20	2300	461	0.89	0.0060	0.0052

Prop-G means the proportion of genetic variance contributed by the QTL and Prop-P means the proportion of phenotypic variance contributed by the QTL.