Development of New Candidate Gene and EST-Based Molecular Markers for Gossypium Species

Table 3

Genetic and physical mapping of G. arboreum-based EST-SSR markers. (—: physical mapping was inconclusive; X: unlinked marker).

Marker	Annealing temperature (°C)	Euploid CS-B chromosome localization	Aneuploid CS-B chromosome localization	Linkage group
MGAES-2	55	—	—	LG 14
MGAES-3	55	CS-B 01	Te7Sh	LG 14
MGAES-5	55	—	—	X
MGAES-10	50	CS-B 15Sh	—	X
MGAES-11	50	—	Te9Lo, H9	LG 9
MGAES-21	55	XX	Te20Lo, H20	X
MGAES-22	55	CS-B 01	—	X
MGAES-25	55	—	—	LG 5
MGAES-27	50	—	—	X
MGAES-28	55	CS-B 10	H3Sub, Te11Lo, H11, NTN12-11	LG 7
MGAES-40	50	CS-B26Lo		X
MGAES-41	55	—	—	X
MGAES-43	50	—	—	X
MGAES-44	55	—	—	LG 5
MGAES-49	55	—	—	LG 6
MGAES-51	55	—	—	LG 6
MGAES-57	55	NTN17-11	H3Sub	X
MGAES-58	55	—	H3Sub	LG 10
MGAES-64	55	CS-B 11Sh	Te11Lo, H11, NTN12-11	LG 7
MGAES-72	55	—	—	X
MGAES-73	55	—	—	X
MGAES-78	55	CS-B 11Sh	Te11Lo, H11	LG 7
MGAES-80	55	—	—	X
MGAES-81	50	—	—	X
MGAES-82	55	—	—	X
MGAES-83	55	CS-B04, CS-B 14Sh, NTN4-15, NTN10-19	—	X
MGAES-87	55	CS-B 11Sh	Te11Lo, H10	LG 4
MGAES-91	55	—	—	X
MGAES-95	55	CS-B 02	Te2Lo, H3SuB	X
MGAES-104	50	—	—	X
MGAES-105	55	—	Te15, Te20Lo, H3Sub	LG 5
MGAES-106	55	CS-B26Lo	H12, NTN12-11	LG 3
MGAES-107	55	—	Te7Lo	X
MGAES-111	50	—	—	X
MGAES-122	50	CS-B 11Sh, NTN17-11	—	LG 12
MGAES-126	50	—	—	LG 8
MGAES-130	55	NTN4-15	H3Sub	LG 13
MGAES-135	55	CS-B 18	Te18Lo, H18	LG 1
MGAES-141	55	—	—	LG 2
MGAES-142	55	—	H10	X
MGAES-143	55	—	—	LG 11
MGAES-153	50	CS-B 01	—	X
MGAES-157	55	—	—	X
MGAES-160	50	—	—	X
MGAES-161	50	—	—	X
MGAES-165	50	—	—	X
MGAES-194	55	—	—	LG 2
MGAES-200	50	—	—	X