Table 1: Coverage of chromosomes by hypothetical Micro-Tom BAC contigs.

SL2.40ch01SL2.40ch02SL2.40ch03SL2.40ch04SL2.40ch05SL2.40ch06SL2.40ch07SL2.40ch08SL2.40ch09SL2.40ch10SL2.40ch11SL2.40ch12Total (ch01–ch12)

EuchromatinChromosome length27,903,72024,734,12216,423,96013,871,28810,836,57317,576,24817,480,11815,552,43010,522,3009,129,27311,175,20312,034,427187,239,662
Euchromatinno. of Contigs1007845343252535537254544600
Euchromatinno. of BACs5335044012311703392242791761971843173,555
EuchromatinCovered bases17,310,73414,644,41211,678,9416,261,5405,377,57610,621,7198,336,3109,541,8476,047,3655,473,7016,855,8768,119,058110,269,079
EuchromatinUncovered bases10,592,98610,089,7104,745,0197,609,7485,458,9976,954,5299,143,8086,010,5834,474,9353,655,5724,319,3273,915,36976,970,583
Euchromatin% Coverage62.0%59.2%71.1%45.1%49.6%60.4%47.7%61.4%57.5%60.0%61.3%67.5%58.9%

HeterochromatinChromosome length62,400,52425,184,17248,416,75450,193,02454,184,86528,465,38847,788,50347,480,22757,139,79155,705,03242,210,82253,451,826572,620,928
Heterochromatinno. of Contigs17574147131169761351501491591281551,648
Heterochromatinno. of BACs1,0003919031,0227525449598561,2091,05674699210,430
HeterochromatinCovered bases39,941,03315,405,50732,458,03134,993,23831,099,72719,672,86535,988,22933,980,70240,376,42737,964,12827,534,10936,150,348385,564,344
HeterochromatinUncovered bases22,459,4919,778,66515,958,72315,199,78623,085,1388,792,52311,800,27413,499,52516,763,36417,740,90414,676,71317,301,478187,056,584
Heterochromatin% Coverage64.0%61.2%67.0%69.7%57.4%69.1%75.3%71.6%70.7%68.2%65.2%67.6%67.3%

TotalChromosome length90,304,244 49,918,294 64,840,714 64,064,312 65,021,438 46,041,636 65,268,621 63,032,657 67,662,091 64,834,305 53,386,025 65,486,253 759,860,590
Totalno. of Contigs275 152 192 165 201 128 188 205 186 184 173 199 2,248
Totalno. of BACs1,533 895 1,304 1,253 922 883 1,183 1,135 1,385 1,253 930 1,309 13,985
TotalCovered bases57,251,767 30,049,919 44,136,972 41,254,778 36,477,303 30,294,584 44,324,539 43,522,549 46,423,792 43,437,829 34,389,985 44,269,406 495,833,423
TotalUncovered bases33,052,477 19,868,375 20,703,742 22,809,534 28,544,135 15,747,052 20,944,082 19,510,108 21,238,299 21,396,476 18,996,040 21,216,847 264,027,167
Total% Coverage63.4%60.2%68.1%64.4%56.1%65.8%67.9%69.1%68.6%67.0%64.4%67.6%65.3%