|
| Cotton QTL regiona | Arabidopsis syntenic segmentsb | Arabidopsis genes | Gene function |
|
C, FF
(Chr. 2; 64–77.6 cM) | D05.99 | AT1G23130 | Defense response |
|
OP, Ch-a
(Chr. 4; 29–93.5 cM) | D03.92 | AT1G09250 | Regulation of transcription |
| D06.26 | AT1G31930 | G-protein coupled receptor protein signaling pathway |
| D08.54 | AT3G21240 | Response to UV, response to wounding |
| D11.56 | AT2G45070 | Protein transporter activity |
|
BW, DM, SC, HI
(Chr. 5; 36.7–106.2 cM) | D05.114 | AT1G77760 | Response to light stimulus |
| D15.111 | AT3G16940 | Calmodulin binding, transcription regulator activity |
| D23.119 | AT5G09800 | Protein ubiquitination |
| D01.119 | AT4G00720 | Kinase activity |
| D01.121 | AT1G23740 | Zinc ion binding |
| D02.120 | AT2G32250 | Response to red or far red light, zinc ion binding |
| D10.124 | AT2G17290 | Abscisic acid mediated signaling, regulation of stomatal movement |
| D11.122 | AT2G35890 | Calmodulin-dependent protein kinase activity |
| D12.116 | AT5G28000 | Response to biotic stimulus, defense response |
| D12.121 | AT3G05530 | Calmodulin binding, ubiquitin-dependent protein catabolic process |
| DS07.115 | AT5G23420 | Regulation of transcription |
| DS07.115 | AT5G23540 | Ubiquitin-dependent protein catabolic process |
|
FS
(Chr. 7; 91.2–131.4 cM) | D01.150 | AT1G03010 | Response to light stimulus, signal transducer activity |
| D11.66 | AT2G37250 | Nucleotide kinase activity |
| D11.66 | AT2G37710 | Kinase activity |
| D12.153 | AT3G02940 | Response to salicylic acid stimulus, regulation of transcription |
| D23.149 | AT5G64330 | Signal transducer activity |
| D23.33 | AT5G65020 | Calcium-dependent phospholipid binding |
|
SC, HI, BW, OP
(Chr. 7; 167–217 cM) | D02.67 | AT2G31750 | Abscisic acid glucosyltransferase activity |
| D03.143 | AT1G12270 | Response to stress |
| D09.70 | AT5G41360 | Response to UV-B |
| D09.70 | AT5G42020 | Response to heat |
| D15.164 | AT4G14130 | Xyloglucan endotransglycosylase-related protein |
| D15.164 | AT3G23830 | Response to osmotic stress, response to salt stress |
| DS02.34 | AT3G26700 | Kinase activity |
| DS02.69 | AT3G26700 | Kinase activity |
|
Ch-a, Chl-b, δ13C
(Chr. 8; 44.9–52.3 cM) | D06.183 | AT1G31930 | G-protein coupled receptor protein signaling pathway |
| D06.29 | AT1G32640 | Response to desiccation, response to abscisic acid stimulus |
| D10.73 | AT2G22800 | Regulation of transcription, DNA-dependent |
| D21.17 | AT5G47030 | ATP synthesis coupled proton transport |
|
OP, SC, CT, HI
(Chr. 10; 77.5–122.2 cM) | D10.232 | AT4G37930 | Oxygen and reactive oxygen species metabolic process |
| D10.232 | AT5G20720 | Response to cold, calmodulin binding |
| D17.231 | AT2G43220 | Zinc ion binding |
| D07.243 | AT4G09460 (MYB2.1) | Response to abscisic acid stimulus, response to salt stress, response to ethylene stimulus |
| D11.165 | AT3G61150 | Regulation of transcription, DNA-dependent |
|
BW, HI, SC
(Chr. 12; 0–25.5 cM) | D10.175 | AT4G37930 | Oxygen and reactive oxygen species metabolic process |
| D17.269 | AT3G43810 | Calcium-mediated signaling |
|
HI, SC
(Chr. 13; 42.6–50.7 cM) | D03.88 | AT1G08810 | Stomatal movement, response to water deprivation, abscisic acid stimulus, salt stress, salicylic acid stimulus |
| D12.292 | AT5G18100 | Oxygen and reactive oxygen species metabolic process copper, zinc superoxide dismutase activity |
|
OP
(Chr. 13; 131.5–149.7 cM) | D10.303 | AT4G37930 | Oxygen and reactive oxygen species metabolic process |
| D10.303 | AT4G38230 | Calmodulin-dependent protein kinase activity |
| D10.304 | AT2G21510 | Heat shock protein binding |
| D11.187 | AT2G37290 | Regulation of Rab GTPase activity |
|
