Table 4: DEGs encoding lectin receptor kinases and glutamate receptors.

Apple gene modelFunctional annotationsLog2FC

L-type lectin-domain containing receptor kinase
 MDP0000142818L-type lectin-RLK; IV.1-like+5.5
 MDP0000226962L-type lectin-RLK; L-type lectin-RLK X.1+2.5
 MDP0000265486L-type lectin-RLK; IX.1-like [Malus domestica]+5.4
 MDP0000305188L-type lectin-RLK; IX.1-like+4.1
 MDP0000176219L-type lectin-RLK; IX.1-like+4.0
 MDP0000199947L-type lectin-RLK, IX.1-like+2.1
 MDP0000130183L-type lectin-RLK, S.1-like−3.3
 MDP0000133353L-type lectin-RLK, S.4-like+2.6
 MDP0000200920L-type lectin-RLK, S.4-like−4.0
 MDP0000145928L-type lectin-RLK, VIII.2-like−3.2

G-type lectin S-receptor-like serine/threonine-protein kinase
 MDP0000297547G-type lectin SRK, At1g11410+3.9
 MDP0000303074G-type lectin SRK, At1g11410+3.7
 MDP0000930643G-type lectin SRK, At1g11410 isoform X1+6.0
 MDP0000296847G-type lectin SRK, At1g11410 isoform X2+2.0
 MDP0000263753G-type lectin SRK, At1g61500+2.2
 MDP0000278380G-type lectin SRK, At1g61500+2.5
 MDP0000212928G-type lectin SRK, At1g61500+2.4
 MDP0000550024G-type lectin SRK, At1g61550+2.5
 MDP0000172360G-type lectin SRK, At1g61550−2.3
 MDP0000204472G-type lectin SRK, At1g61550−2.9
 MDP0000936164G-type lectin SRK, At1g67520+6.0
 MDP0000284325G-type lectin SRK, At2g19130+3.0
 MDP0000654452G-type lectin SRK, At2g19130+2.4
 MDP0000314519G-type lectin SRK, At4g27290+2.3
 MDP0000189422G-type lectin SRK, At4g27290+2.1
 MDP0000281186G-type lectin SRK, At4g27290 isoform X1−2.6
 MDP0000213485G-type lectin SRK, At4g27290 isoform X5−2.3
 MDP0000293905G-type lectin SRK, RKS12.6
 MDP0000314952G-type lectin SRK, RKS1, isoform X4−2.9
 MDP0000288873G-type lectin SRK, RLK1+4.7
 MDP0000189901G-type lectin SRK, RLK1+4.7
 MDP0000217223G-type lectin SRK, RLK1+3.2
 MDP0000627319G-type lectin SRK, RLK1+3.2
 MDP0000322228G-type SRK, RLK1+3.2
 MDP0000310978G-type lectin SRK, SD1-1−4.4

Glutamate receptor
 MDP0000176838Glutamate receptor 1.3-like+2.2
 MDP0000314708Glutamate receptor 2.2-like+2.3
 MDP0000450755Glutamate receptor 2.2-like−3.1
 MDP0000771031Glutamate receptor 2.7-like+2.7
 MDP0000318184Glutamate receptor 2.7-like+2.3
 MDP0000220955Glutamate receptor 2.8-like+4.8
 MDP0000291967Glutamate receptor 2.8-like−2.6
 MDP0000228982Glutamate receptor 2.8-like−2.9
 MDP0000255245Glutamate receptor 2.8-like−4.4
 MDP0000154359Glutamate receptor 2.8-like−4.7
 MDP0000307622Glutamate receptor 3.4-like+5.2
 MDP0000199967Glutamate receptor 3.4-like+4.9
 MDP0000307121Glutamate receptor 3.4-like+4.2
 MDP0000487438Glutamate receptor 3.6-like+2.0

Apple gene model is based on available Malus_x_domestica.v3.0.a1_gene_set at https://www.rosaceae.org. Function annotation is based on the blastX search against NR database in GenBank. Variations of transcript abundance are based on the comparison between B.9 and G.935 and expressed as Log2fold change; + indicated higher transcript level in the root of G.935 over that in B.9; indicated the opposite.