International Journal of Proteomics / 2013 / Article / Tab 2

Research Article

iTRAQ-Based and Label-Free Proteomics Approaches for Studies of Human Adenovirus Infections

Table 2

Number of proteins commonly quantified with pairs of software packages.

Software packagesNumber of quantified proteins
HAdV-B3-infected cells
Number of quantified proteins
HAdV-C5-infected cells

ProgenesisF-T2PQ versus Progenesis LC-MS438438
ProgenesisF-T2PQ versus ProgenesisF-T3PQ347347
ProteinPilot versus ProgenesisF-T2PQ406410
ProteinPilot versus Progenesis LC-MS569564
ScaffoldQ+ versus ProgenesisF-T2PQ396394
ScaffoldQ+ versus Progenesis LC-MS535532
ScaffoldQ+ versus ProteinPilot1,2671,263