Research Article

Hardware Accelerated Sequence Alignment with Traceback

Table 1

Resource usage.

Component Slices FPGA percentage

PCI Express 6175 14.6%
Host interface 1221 2.9%
4-port switch 448 1.1%
Traceback 283 0.7%
DP FIFO 192 0.5%
PE (one) 111 0.3%