Research Article

Simulated Annealing with Previous Solutions Applied to DNA Sequence Alignment

Table 2

Values of parameters.

Algorithm Gen

SA env 2,639.71 0.43 26.53 1.06
SAPS env 1,269.61 0.43 12.76 1.07
SA gag 1,211.90 0.43 12.18 1.07
SAPS gag 365.16 0.43 3.67 1.08
SA nef 883.55 0.43 8.88 1.07
SAPS nef 787.04 0.43 7.61 1.07
SA pol 369.14 0.43 3.71 1.08
SAPS pol 436.80 0.43 4.39 1.08
SA rev 5,726.18 0.43 57.55 1.06
SAPS rev 6,651.52 0.43 66.85 1.06
SA tat 6,151.04 0.43 61.82 1.06
SAPS tat 6,594.80 0.43 66.28 1.06
SA vif 666.64 0.43 6.70 1.07
SAPS vif 1,349.21 0.43 13.56 1.07
SA vpr 1,248.71 0.43 12.55 1.07
SAPS vpr 1,784.02 0.43 17.93 1.07
SA vpu 4,556.07 0.43 45.79 1.06
SAPS vpu 1609.90 0.43 16.16 1.07