Table of Contents
ISRN AIDS
Volume 2012, Article ID 823605, 9 pages
http://dx.doi.org/10.5402/2012/823605
Research Article

Conservation, Compensation, and Evolution of N-Linked Glycans in the HIV-1 Group M Subtypes and Circulating Recombinant Forms

Medical Research Council Unit for Bioinformatics Capacity Development, South African National Bioinformatics Institute, University of the Western Cape, Private Bag X17, Belville 7535, South Africa

Received 18 October 2012; Accepted 25 November 2012

Academic Editors: Z. Banki and M. Gherardi

Copyright © 2012 Simon A. Travers. This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.

Supplementary Material

For each subtype/CRF, all available full length sequences were retrieved from the Los Alamos National Laboratory (LANL) HIV Sequence Database (http://www.hiv.lanl.gov/). Using the patient and isolate annotation, where available, multiple sequences representing single individuals were removed to ensure that the dataset representing each subtype/CRF was non-redundant. The fragment of the envelope gene that encodes for gp120 was excised from each full genome and separate datasets generated for each of the subtypes/CRFs studied. This supplementary table details all of the DNA sequences used in this study together with their designated subtype/CRF, genbank accession number, the country of origin and, where available, the year of sampling.

  1. Supplementary Table