Research Article
HMEC: A Heuristic Algorithm for Individual Haplotyping with Minimum Error Correction
Table 5
Reconstruction rate and running time of HapCUT and HMEC with 35% coverage on HuRef data.
| Error rate | HapCUT | HMEC | Reconstruction rate | Time (sec) | Reconstruction rate | Time (sec) |
| 10 | 0.988 | 181.025 | 1.000 | 0.158 | 15 | 0.988 | 132.434 | 1.000 | 0.127 | 20 | 0.988 | 231.989 | 0.999 | 0.105 | 25 | 0.987 | 210.040 | 0.998 | 0.101 | 30 | 0.988 | 217.292 | 0.996 | 0.102 | 40 | 0.987 | 215.533 | 0.995 | 0.100 |
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