The P25 Ookinete Surface Proteins: Homology Modeling and Phylogenetic Relationships

Table 2

Conserved domain-domain interactions in P25 proteins (hydrogen bonds only).

ATOM 1				EGF domain; involved	ATOM 2				EGF domain; involved	H-Bond distance
Atom no.	Atom name	Res. name	Res. no.		Atom no.	Atom name	Res. name	Res. no.
(1) Pbs25 protein and Pvs25 protein
119	N	SER	17	B	857	O	CYS	113	G	2.80
130	ND2	ASN	18	B	845	O	CYS	111	G	2.67
102	N	GLN	15	B	1166	O	TYR	153	O	3.08
110	O	GLN	15	B	1155	N	TYR	153	O	2.95
227	N	HIS	30	B	399	OE1	GLU	53	R	3.14
236	O	HIS	30	B	403	N	PHE	54	R	2.77
229	ND1	HIS	30	B	399	OE1	GLU	53	R	2.76
866	N	ILE	115	G	1142	O	ASP	151	O	2.83
(2) Pcs25 protein and Pvs25 protein
116	N	SER	17	B	873	O	CYS	115	G	2.83
119	OG	SER	17	B	868	N	CYS	115	G	2.66
122	N	ASN	18	B	865	OG	SER	114	G	3.04
132	ND1	HIS	19	B	865	OG	SER	114	G	2.70
31	OD1	ASP	5	B	1056	NZ	LYS	140	O	2.70
99	N	GLN	15	B	1174	O	TYR	155	O	3.08
107	O	GLN	15	B	1163	N	TYR	155	O	2.96
104	OE1	GLN	15	B	1033	N	GLN	138	O	2.71
105	NE2	GLN	15	B	1026	O	ALA	136	O	2.76
225	O	HIS	30	B	405	N	PHE	54	R	2.75
218	ND1	HIS	30	B	401	OE1	GLU	53	R	2.66
879	N	ILE	117	G	1154	O	GLY	153	O	2.81
681	N	CYS	89	G	665	O	LEU	86	R	2.98
(3) Pfs25 protein and Pvs25 protein
116	NE2	GLN	15	B	1005	O	LYS	134	G	2.66
127	N	SER	17	B	846	O	CYS	113	G	2.77
130	OG	SER	17	B	841	N	CYS	113	G	2.67
139	ND1	HIS	19	B	838	OG	SER	112	G	2.77
35	OD1	ASP	5	B	1032	NZ	LYS	138	O	3.00
110	N	GLN	15	B	1149	O	TYR	153	O	3.05
118	O	GLN	15	B	1138	N	TYR	153	O	2.96
115	OE1	GLN	15	B	1012	N	SER	136	O	2.85
254	OE2	GLU	33	B	582	OH	TYR	76	R	2.62
855	N	ILE	115	G	1129	O	GLY	151	O	2.62
(4) Pgs25 protein and Pvs25 protein
127	N	SER	17	B	865	O	CYS	112	G	2.82
133	N	ASN	18	B	857	OG	SER	111	G	2.96
143	ND1	HIS	19	B	857	OG	SER	111	G	2.80
37	OD1	ASN	5	B	1052	NZ	LYS	137	O	2.70
110	N	GLN	15	B	1170	O	TYR	152	O	3.09
118	O	GLN	15	B	1159	N	TYR	152	O	2.93
235	O	LEU	30	B	406	N	PHE	54	R	2.76
255	OE2	GLU	33	B	581	OH	TYR	75	R	2.78
877	N	ILE	114	G	1150	O	GLY	150	O	2.75
(5) Pin25 protein and Pvs25 protein
116	N	SER	17	B	847	O	CYS	115	G	2.85
132	ND1	HIS	19	B	839	OG	SER	114	G	2.70
31	OD1	ASP	5	B	1030	NZ	LYS	140	O	2.92
99	N	GLN	15	B	1150	O	TYR	155	O	3.09
107	O	GLN	15	B	1139	N	TYR	155	O	2.96
104	OE1	GLN	15	B	1007	N	GLN	138	O	2.75
105	NE2	GLN	15	B	1000	O	ALA	136	O	3.01
225	O	HIS	30	B	397	N	PHE	54	R	2.75
245	OE2	GLU	33	B	573	OH	TYR	77	R	2.67
853	N	ILE	117	G	1131	O	GLY	153	O	2.81
652	N	CYS	89	G	639	O	LEU	86	R	2.97
(6) Pos25 protein and Pvs25 protein
120	N	SER	17	B	865	O	CYS	113	G	2.83
123	OG	SER	17	B	860	N	CYS	113	G	2.66
126	N	ASN	18	B	857	OG	SER	112	G	3.08
136	ND1	HIS	19	B	857	OG	SER	112	G	2.70
103	N	GLN	15	B	1172	O	PHE	153	O	3.12
111	O	GLN	15	B	1162	N	PHE	153	O	2.95
109	NE2	GLN	15	B	1022	O	GLU	134	O	3.01
234	O	HIS	30	B	413	N	TYR	54	R	2.79
874	N	ILE	115	G	1153	O	GLY	151	O	2.88
683	N	CYS	88	G	668	O	PRO	85	R	2.93
(7) Prs25 protein and Pvs25 protein
125	N	SER	17	B	841	O	CYS	113	G	2.84
128	OG	SER	17	B	836	N	CYS	113	G	2.66
35	OD1	ASP	5	B	1024	NZ	LYS	138	O	2.86
108	N	GLN	15	B	1141	O	TYR	153	O	3.03
116	O	GLN	15	B	1130	N	TYR	153	O	2.91
113	OE1	GLN	15	B	1004	N	SER	136	O	2.73
252	OE2	GLU	33	B	576	OH	TYR	76	R	2.59
850	N	ILE	115	G	1121	O	GLY	151	O	2.77
(8) Pys25 protein and Pvs25 protein
117	N	SER	17	B	851	O	CYS	113	G	2.81
123	N	ASN	18	B	843	OG	SER	112	G	2.94
127	OD1	ASN	18	B	843	OG	SER	112	G	3.32
128	ND2	ASN	18	B	839	O	CYS	111	G	2.66
133	ND1	HIS	19	B	843	OG	SER	112	G	2.69
100	N	GLN	15	B	1159	O	TYR	153	O	3.08
108	O	GLN	15	B	1148	N	TYR	153	O	2.95
105	OE1	GLN	15	B	1012	N	SER	136	O	2.68
106	NE2	GLN	15	B	1005	O	LEU	134	O	2.97
223	N	HIS	30	B	395	OE1	GLU	53	R	3.05
232	O	HIS	30	B	399	N	PHE	54	R	2.76
225	ND1	HIS	30	B	395	OE1	GLU	53	R	3.07
250	OD1	ASN	33	B	580	OH	TYR	76	R	2.58