Exploiting Identifiability and Intergene Correlation for Improved Detection of Differential Expression

Table 1

Top  100  𝑡¹_𝑔̃ scores determined by re-ranking. Corresponding 𝑡_𝑔 scores and their ranks are also shown. The results are for some of the 𝐗 realizations from Figure 4(b). Data representing false discoveries are printed in boldface. #̃𝑡¹_𝑔^def= rank based on 𝑡¹_𝑔̃ score, #=_𝑡𝑔^def rank based on raw 𝑡_𝑔 score.

#̃𝑡^1𝑔	𝑡^1𝑔̃	𝑡𝑔	#𝑡𝑔
1–50
1	4.22	5.87	1
2	−4.17	−5.55	2
3	−3.93	−4.26	5
4	−3.74	−4.12	7
5	−3.58	−4.49	4
6	−3.49	−3.34	28
7	−3.45	−4.25	6
8	3.35	3.87	10
9	−3.33	−3.20	35
10	3.33	3.77	13
11	3.25	3.42	25
12	−3.16	−2.18	260
13	3.14	4.54	3
14	3.10	2.87	65
15	−3.08	−3.54	17
16	−3.07	−2.80	80
17	3.06	3.49	20
18	3.02	2.29	213
19	−2.99	−3.34	27
20	−2.93	−3.13	38
21	−2.92	−2.92	57
22	2.86	3.26	31
23	−2.83	−2.82	74
24	2.82	2.37	180
25	−2.81	−2.13	276
26	2.81	3.48	21
27	−2.79	−3.01	47
28	2.70	2.87	64
29	−2.66	−3.15	37
30	−2.58	−3.85	11
31	−2.56	−2.84	71
32	−2.55	−1.72	524
33	−2.54	−2.63	106
34	−2.54	−2.69	98
35	2.53	2.30	209
36	2.48	2.45	148
37	−2.47	−2.29	212
38	−2.46	−3.21	33
39	−2.43	−2.44	154
40	2.43	2.71	94
41	2.40	2.86	66
42	−2.34	−2.60	115
43	−2.34	−2.98	50
44	−2.33	−3.80	12
45	−2.32	−2.06	306
46	2.29	1.81	444
47	−2.27	−1.17	1110
48	2.26	1.97	347
49	2.24	3.75	14
50	2.20	3.88	9
51–100
51	2.18	3.45	23
52	2.17	3.05	42
53	2.16	2.80	82
54	−2.15	−2.57	122
55	2.15	1.96	357
56	−2.14	−1.47	751
57	2.13	2.25	229
58	2.13	1.77	486
59	2.13	1.44	785
60	2.12	2.14	273
61	−2.11	−1.48	744
62	2.10	1.80	453
63	2.09	2.60	114
64	−2.09	−2.05	312
65	2.09	2.70	96
66	2.09	2.23	237
67	2.08	2.34	188
68	−2.08	−2.24	232
69	−2.06	−2.53	130
70	−2.04	−2.11	283
71	−2.04	−2.95	54
72	−2.03	−3.08	40
73	−2.02	−2.30	210
74	−2.01	−3.67	15
75	2.00	2.62	109
76	−1.98	−2.38	171
77	1.98	1.43	795
78	1.96	1.69	549
79	−1.95	−1.47	746
80	1.95	1.95	361
81	1.95	2.81	77
82	−1.94	−1.41	813
83	1.94	3.40	26
84	1.94	1.30	948
85	−1.94	−3.27	30
86	−1.93	−1.11	1190
87	−1.93	−1.37	872
88	−1.93	−3.44	24
89	−1.92	−3.07	41
90	−1.92	−1.50	726
91	1.90	3.62	16
92	−1.90	−2.82	75
93	1.89	1.25	1007
94	1.87	3.89	8
95	−1.86	−3.49	19
96	−1.86	−2.08	300
97	1.85	1.20	1074
98	−1.83	−2.90	60
99	1.83	1.39	833
100	−1.82	−1.95	367