Table of Contents
ISRN Molecular Biology
Volume 2014, Article ID 828102, 7 pages
http://dx.doi.org/10.1155/2014/828102
Research Article

Identification of QTLs for Resistance to Sclerotinia sclerotiorum in Carioca Common Bean by the Moving Away Method

1Laboratório Genética Molecular, Departamento de Biologia, Universidade Federal de Lavras, Lavras, MG, Brazil
2Departamento de Ciências Exatas, Universidade Federal de Lavras, Lavras, MG, Brazil

Received 9 November 2013; Accepted 23 December 2013; Published 6 February 2014

Academic Editors: R. Kiyama, A. J. Molenaar, and T. Tozaki

Copyright © 2014 Letícia A. de C. Lara et al. This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.

Linked References

  1. A. P. de Silva, M. D. Bolton, and B. D. Nelson, “Transformation of sclerotinia sclerotiorum with the green fluorescent protein gene and fluorescence of hyphae in four inoculated hosts,” Plant Pathology, vol. 58, no. 3, pp. 487–496, 2009. View at Publisher · View at Google Scholar · View at Scopus
  2. P. R. C. Gonçalves and J. B. Santos, “Physiological resistance of common bean cultivars and lines to white mold based on oxalic acid reaction,” Annual Report of the Bean Improvement Cooperative, vol. 53, pp. 236–237, 2010. View at Google Scholar
  3. E. D. Tolêdo-Souza and J. L. S. Costa, “Métodos de inoculação de plântulas de feijoeiro para avaliação de germoplasma quanto à resistência a Sclerotinia sclerotiorum(Lib.) De Bary,” Pesquisa Agropecuária Tropical, vol. 33, no. 2, pp. 57–63, 2003. View at Google Scholar
  4. R. Petzoldt and M. H. Dickson, “Straw test for resistance to white mold in beans,” Annual Report of the Bean Improvement Cooperative, vol. 39, pp. 142–143, 1996. View at Google Scholar
  5. H. Terán and S. P. Singh, “Response of dry bean genotypes with different levels of resistance to Sclerotinia sclerotiorumto three inoculation methods,” Annual Report of Bean Improvement Cooperative, vol. 51, pp. 218–219, 2008. View at Google Scholar
  6. E. S. Lander and D. Botstein, “Mapping mendelian factors underlying quantitative traits using RFLP linkage maps,” Genetics, vol. 121, no. 1, pp. 185–199, 1989. View at Google Scholar · View at Scopus
  7. R. Wu, C. X. Ma, and G. Casella, Statistical Genetics of Quantitative Traits: Linkage, Maps and QTL, Springer, New York, NY, USA, 2007.
  8. R. W. Doerge, Z.-B. Zeng, and B. S. Weir, “Statistical issues in the search for genes affecting quantitative traits in experimental populations,” Statistical Science, vol. 12, no. 3, pp. 195–219, 1997. View at Google Scholar · View at Scopus
  9. H. Wang, Y.-M. Zhang, X. Li et al., “Bayesian shrinkage estimation of quantitative trait loci parameters,” Genetics, vol. 170, no. 1, pp. 465–480, 2005. View at Publisher · View at Google Scholar · View at Scopus
  10. S. Xu, “Estimating polygenic effects using markers of the entire genome,” Genetics, vol. 163, no. 2, pp. 789–801, 2003. View at Google Scholar · View at Scopus
  11. C. A. Silva, F. B. Â. Abreu, M. A. P. Ramalho, and J. E. S. Carneiro, “Implicações da origem das linhagens de feijoeiro na magnitude da interação com ambientes,” Pesquisa Agropecuária Brasileira, vol. 46, no. 7, pp. 720–728, 2011. View at Google Scholar
  12. P. S. Singh and H. Terán, “Evolution of screening methods for detection of physiological resistance to white mold in common bean,” Annual Report of the Bean Improvement Cooperative, vol. 51, pp. 40–41, 2008. View at Google Scholar
  13. T. B. Rodrigues and J. B. dos Santos, “Effect of natural selection on common bean (Phaseolus vulgaris) microsatellite alleles,” Genetics and Molecular Biology, vol. 29, no. 2, pp. 345–352, 2006. View at Publisher · View at Google Scholar · View at Scopus
  14. M. Soule, L. Porter, J. Medina, G. P. Santana, M. W. Blair, and P. N. Miklas, “Comparative QTL map for white mold resistance in common bean, and characterization of partial resistance in dry bean lines VA19 and I9365-31,” Crop Science, vol. 51, no. 1, pp. 123–139, 2011. View at Publisher · View at Google Scholar · View at Scopus
  15. W. K. Hastings, “Monte carlo sampling methods using markov chains and their applications,” Biometrika, vol. 57, no. 1, pp. 97–109, 1970. View at Publisher · View at Google Scholar · View at Scopus
  16. N. Metropolis, A. W. Rosenbluth, M. N. Rosenbluth, A. H. Teller, and E. Teller, “Equation of state calculations by fast computing machines,” The Journal of Chemical Physics, vol. 21, no. 6, pp. 1087–1092, 1953. View at Google Scholar · View at Scopus
  17. S. Banerjee, B. S. Yandell, and N. J. Yi, “Bayesian quantitative trait loci mapping for multiple traits,” Genetics, vol. 179, no. 4, pp. 2275–2289, 2008. View at Publisher · View at Google Scholar · View at Scopus
  18. J. M. Satagopan, B. S. Yandell, M. A. Newton, and T. C. Osborn, “A Bayesian approach to detect quantitative trait loci using Markov chain Monte Carlo,” Genetics, vol. 144, no. 2, pp. 805–816, 1996. View at Google Scholar · View at Scopus
  19. R. Yang and S. Xu, “Bayesian shrinkage analysis of quantitative trait loci for dynamic traits,” Genetics, vol. 176, no. 2, pp. 1169–1185, 2007. View at Publisher · View at Google Scholar · View at Scopus
  20. W. Mkwaila, K. A. Terpstra, M. Ender, and J. D. Kelly, “Identification of QTL for agronomic traits and resistance to white mold in wild and landrace germplasm of common bean,” Plant Breeding, vol. 130, no. 6, pp. 665–672, 2011. View at Publisher · View at Google Scholar · View at Scopus
  21. H. F. Schwartz and S. P. Singh, “Breeding common bean for resistance to white mold: a review,” Crop Science, vol. 53, no. 5, pp. 1832–1844, 2013. View at Google Scholar
  22. J. J. Maxwell, M. A. Brick, P. F. Byrne et al., “Quantitative trait loci linked to white mold resistance in common bean,” Crop Science, vol. 47, no. 6, pp. 2285–2294, 2007. View at Publisher · View at Google Scholar · View at Scopus
  23. S. O. Park, D. P. Coyne, J. R. Steadman, and P. W. Skroch, “Mapping of QTL for resistance to white mold disease in common bean,” Crop Science, vol. 41, no. 4, pp. 1253–1262, 2001. View at Google Scholar · View at Scopus
  24. M. W. Blair, H. F. Buendía, M. C. Giraldo, I. Métais, and D. Peltier, “Characterization of AT-rich microsatellites in common bean (Phaseolus vulgaris L.),” Theoretical and Applied Genetics, vol. 118, no. 1, pp. 91–103, 2008. View at Publisher · View at Google Scholar · View at Scopus
  25. C. H. Galeano, A. C. Fernández, M. Gómez, and M. W. Blair, “Single strand conformation polymorphism based SNP and Indel markers for genetic mapping and synteny analysis of common bean (Phaseolus vulgaris L.),” BMC Genomics, vol. 10, article 629, 2009. View at Publisher · View at Google Scholar · View at Scopus
  26. M. W. Blair, J. I. Medina, C. Astudillo et al., “QTL for seed iron and zinc concentration and content in a mesoamerican common bean (Phaseolus vulgaris L.) population,” Theoretical and Applied Genetics, vol. 121, no. 6, pp. 1059–1070, 2010. View at Publisher · View at Google Scholar · View at Scopus
  27. M. W. Blair, F. Pedraza, H. F. Buendia et al., “Development of a genome-wide anchored microsatellite map for common bean (Phaseolus vulgaris L.),” Theoretical and Applied Genetics, vol. 107, no. 8, pp. 1362–1374, 2003. View at Publisher · View at Google Scholar · View at Scopus
  28. P. N. Miklas, R. Delorme, and R. Riley, “Identification of QTL conditioning resistance to white mold in snap bean,” Journal of the American Society for Horticultural Science, vol. 128, no. 4, pp. 564–570, 2003. View at Google Scholar · View at Scopus
  29. M. C. M. Grisi, M. W. Blair, P. Gepts, C. Brondani, P. A. A. Pereira, and R. P. V. Brondani, “Genetic mapping of a new set of microsatellite markers in a reference common bean (Phaseolus vulgaris L.) population BAT93 x Jalo EEP558,” Genetics and Molecular Research, vol. 6, no. 3, pp. 691–706, 2007. View at Google Scholar · View at Scopus
  30. P. N. Miklas, L. D. Porter, J. D. Kelly, and J. R. Myers, “Characterization of white mold disease avoidance in common bean,” European Journal of Plant Pathology, vol. 135, no. 3, pp. 525–543, 2013. View at Google Scholar