Research Article

Biophysical and RNA Interference Inhibitory Properties of Oligonucleotides Carrying Tetrathiafulvalene Groups at Terminal Positions

Table 1

Sequences of DNA and RNA oligonucleotides.

No.Sequence (5′-3′)

1TAG AGG CTC CAT TGC
2GCA ATG GAG CCT CTA
3TAG AGG CTC CAT TGC-TTF1
4GCA ATG GAG CCT CTA-TTF1
5TTF1-GCA ATG GAG CCT CTA
6TAG AGG CTC CAT TGC-PYR
7TAG AGG CTC CAT TGC-PFP
8CGC GAA TTC GCG
9CGC GAA TTC GCG-PYR
10CGC GAA TTC GCG-PFP

11auc uga aga agg aga aaa aTT
12uuu uuc ucc uuc uuc aga uTT
13gcu aca gag aaa ucu cga uTT
14auc gag auu ucu cug uag cTT
15auc uga aga agg aga aaa aTT-TTF2
16uuu uuc ucc uuc uuc aga uTT-TTF2

(a)TTF: tetrathiafulvalene, PYR: pyrene, PFP: 2,3,4,5,6-pentafluorophenyl.
Base notation: DNA = A, C, and G; and T. RNA = a, g, c, and u.