| Alkaloids | Binding energies (kcal/mol) | Hydrogen bond interactions | Hydrophobic interactions |
| Redocked pyrimethamine | −7.90 | Ile14, Cys15, Asp54, Asn108, Ile112, | Ala16, Met55, Phe58, Ile164 | Biscryptolepine | −11.4 | | Val45, Leu40, Leu46, Ser111, Ile112, Pro113, Leu119 | Cryptomisrine | −12.5 | | Leu40, Val45, Leu46, Met55, Ser111, Ile112, Phe116 | Cryptolepicarboline | −10.7 | | Val45, Leu46, Met55, Phe58, Ile112, Phe116, Ile164 | Cryptoquindoline | −12.5 | | Ala16, Val45, Leu46, Ser111, Ile112, Pro113 | Cryptospirolepine | −9.90 | | Gly44, Asp194, Val195 | Cryptolepinone | −8.20 | Asp54, Met55 | Ala16, Phe58, Ile112 | 11-isopropylcryptolepine | −8.70 | | Ala16, Met55, Phe58, Met104, lle112, Phe116, Ile164 | Cryptoheptine | −8.10 | Asp54 | Ala16, Leu40, Leu46, Met55, Phe58, Ile112, Leu119 | Cryptolepine | −8.70 | Asp54 | Ala16, Met55, Phe58, Ile112 | Hydroxycryptolepine | −7.90 | Asp54, Met55 | Ala16, Leu46, Phe58 | Isocryptolepine | −8.10 | | Ala16, Leu46, Phe58, Ile112, Leu119, Ile164 | Neocryptolepine | −8.70 | | Ala16, Met55, Phe58, Ile112, Ile164 |
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