Journal of Diabetes Research

Research Article

Expression of Endoplasmic Reticulum Stress-Related Factors in the Retinas of Diabetic Rats

Table 4

Q-PCR array gene table. We selected 89 ER stress-related factors, and other 6 genes as a quality control a total; of 96 genes were detected in Q-PCR arrays.
A01Rn.107561XM_341644AMFRAutocrine motility factor receptorAMFR
A02Rn.161941NM_001108183ARMETArginine rich, mutated in early-stage tumorsARMET
A03Rn.2423NM_024403ATF4Activating transcription factor 4 (tax-responsive enhancer element B67)CREB-2/CREB2
A04Rn.222130NM_001107196ATF6Activating transcription factor 6ATF6A
A05Rn.18179NM_001002809ATF6BActivating transcription factor 6 betaCREB-RP/CREBL1
A06Rn.42932NM_021702ATXN3Ataxin 3AT3/ATX3
A07Rn.10668NM_017059BAXBCL2-associated X proteinBCL2L4
A08Rn.974NM_022399CALRCalreticulinCRT/RO
A09Rn.1762NM_172008.2CANXCalnexinCNX/IP90
A10Rn.97889NM_182814.2CCT4Chaperonin containing TCP1, subunit 4 (delta)CCT-DELTA/Cctd
A11Rn.62267NM_001106603.1CCT7Chaperonin containing TCP1, subunit 7 (eta)CCT-ETA/Ccth
A12Rn.6479NM_024125.4CEBPBCCAAT/enhancer binding protein (C/EBP), betaC/EBP-beta
B01Rn.104043NM_001013092.1CREB3CAMP responsive element binding protein 3LUMAN/LZIP
B02Rn.20059NM_001012115.1CREB3L3CAMP responsive element binding protein 3-like 3CREB-H/CREBH
B03Rn.11183NM_001109986DDIT3DNA-damage-inducible transcript 3CEBPZ/CHOP
B04Rn.110990NM_001014202.1DERL1Der1-like domain family, member 1DER-1/DER1
B05Rn.11209NM_031627CHOPRattus norvegicus nuclear receptor subfamily 1, group H, member 3LXRalpha/Nr1h3
B06Rn.40780NM_001109541DNAJB2DnaJ (Hsp40) homolog, subfamily B, member 2HSJ1/HSPF3
B07Rn.29778NM_012699DNAJB9DnaJ (Hsp40) homolog, subfamily B, member 9DKFZp564F1862/ERdj4
B08Rn.8642NM_001106486DNAJC10DnaJ (Hsp40) homolog, subfamily C, member 10DKFZp434J1813/ERdj5
B09Rn.162234NM_022232DNAJC3DnaJ (Hsp40) homolog, subfamily C, member 3HP58/P58
B10Rn.91398NM_001013196DNAJC4DnaJ (Hsp40) homolog, subfamily C, member 4DANJC4/HSPF2
B11Rn.107459NM_001033909Elf2E74-like factor 2Elf2
B12Rn.81078NM_130422Casp12Caspase 12Casp12
C01Rn.198593NM_001109339eIF2AEukaryotic translation initiation factor 2A, 65 kDaCDA02/EIF-2A
C02Rn.24897NM_031599EIF2AK3Eukaryotic translation initiation factor 2-alpha kinase 3DKFZp781H1925/HRI
C03Rn.19198NM_001037208CRELD2cysteine-rich with EGF-like domains 2Creld2
C04Rn.218563XM_344959.3ERN2Endoplasmic reticulum to nucleus signaling 2Ern2
C05Rn.64648NM_138528ERO1LERO1-like (S. cerevisiae)Ero1l
C06Rn.22325NM_144755TRB3Tribbles homolog 3NIPK/Trib3
C07Rn.2459NM_001008317ERP44Thioredoxin domain containing 4 (endoplasmic reticulum)PDIA10/TXNDC4
C08Rn.57325NM_138917FBXO6F-box protein 6FBG2/FBS2
C09Rn.99241NM_001106334GANABGlucosidase, alpha; neutral ABG2AN/GluII
C10Rn.23744NM_001145840GANCGlucosidase, alpha; neutral CMGC138256
C11Rn.4028NM_053523HERPUD1Homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1Sup
C12Rn.1950NM_212504HSPA1BHeat shock 70 kDa protein 1BHSP70-1B/HSP70-2/Hsp72
D01Rn.187184NM_212546HSPA1L heat shock protein 1-likeHsp70-3/MGC112562/MGC114222
D02Rn.211303NM_021863HSPA2Heat shock protein 2Hspt70/Hst70/MGC93458
D03Rn.163092NM_153629HSPA4Heat shock protein 4Hsp110/ Hsp70/irp94
D04Rn.144829NM_001106428HSPA4LHeat shock protein 4-likeAPG-1; MGC187594; OSP94
D05Rn.11088NM_013083HSPA5Heat shock 70 kDa protein 5 (glucose-regulated protein, 78 kDa)BIP/GRP78
D06Rn.37805NM_001011901HSPH1Heat shock 105 kDa/110 kDa protein 1DKFZp686M05240/HSP105
D07Rn.107325NM_001106599HTRA2HtrA serine peptidase 2OMI/PARK13
D08Rn.163330NM_001107321HTRA4HtrA serine peptidase 4FLJ90724
D09Rn.772NM_022392INSIG1Insulin-induced gene 1CL-6
D10Rn.16736NM_178091INSIG2Insulin-induced gene 2MGC26273
D11Rn.9911NM_012806MAPK10Mitogen-activated protein kinase 10JNK3/JNK3A
D12Rn.4090XM_001056513MAPK8Mitogen-activated protein kinase 8JNK/JNK1
E01Rn.9910NM_017322MAPK9Mitogen-activated protein kinase 9JNK-55/JNK2
E02Rn.2362NM_053569MBTPS1Membrane-bound transcription factor peptidase, site 1PCSK8/S1P
E03Rn.212224NM_001035007MBTPS2Membrane-bound transcription factor peptidase, site 2S2P
E04Rn.144645NM_080577NPLOC4Nuclear protein localization 4 homolog (S. cerevisiae)NPL4
E05Rn.1492NM_053463NUCB1Nucleobindin 1DKFZp686A15286/NUC
E06Rn.1579NM_001007265OS9Osteosarcoma amplified 9, endoplasmic reticulum associated proteinOS-9
E07Rn.11527NM_017319PDIA3Protein disulfide isomerase family A, member 3ER60/ERp57
E08Rn.7627NM_001109476PFDN2Prefoldin subunit 2PFD2
E09Rn.3401NM_001106794PFDN5Prefoldin subunit 5MM-1/MM1
E10Rn.1463NM_017101PPIAPeptidylprolyl isomerase A (cyclophilin A)CYPA/CYPH
E11Rn.2232NM_133546PPP1R15AProtein phosphatase 1, regulatory (inhibitor) subunit 15AGADD34
E12Rn.104417NM_001106806PRKCSHProtein kinase C substrate 80K-HAGE-R2/G19P1
F01Rn.209127NM_001127545RNF139Ring finger protein 139HRCA1/RCA1
F02Rn.209127NM_006913RNF5Ring finger protein 5RING5/RMA1
F03Rn.4224NM_013067RPN1Ribophorin IDKFZp686B16177/OST1
F04Rn.99548NM_001100966SCAPSREBF chaperoneKIAA0199
F05Rn.98327NM_001034129SEC62SEC62 homolog (S. cerevisiae)Dtrp1/HTP1
F06Rn.24233NM_001107637SEC63SEC63 homolog (S. cerevisiae)ERdj2/PRO2507
F07Rn.20802NM_177933SEL1LSel-1 suppressor of lin-12-like (C. elegans)IBD2/PRO1063
F08Rn.4197NM_173120SELSSelenoprotein SAD-015/ADO15
F09Rn.2119NM_030835SERP1Stress-associated endoplasmic reticulum protein 1RAMP4
F10Rn.103851NM_199376SIL1SIL1 homolog, endoplasmic reticulum chaperone (S. cerevisiae)BAP/MSS
F11Rn.221929XM_001075680SREBF1Sterol regulatory element binding transcription factor 1SREBP-1c/SREBP1
F12Rn.41063NM_001033694SREBF2Sterol regulatory element binding transcription factor 2SREBP2/bHLHd2
G01Rn.162486NM_001100739SYVN1Synovial apoptosis inhibitor 1, synoviolinHRD1
G02Rn.7102NM_012670TCP1T-complex 1CCT-alpha/CCT1
G03Rn.20041NM_153303TOR1ATorsin family 1, member A (torsin A)DQ2/DYT1
G04Rn.139603NM_001106380UBE2G2Ubiquitin-conjugating enzyme E2G 2 (UBC7 homolog, yeast)UBC7
G05Rn.106299NM_001007655UBE2J2Ubiquitin-conjugating enzyme E2, J2 (UBC6 homolog, yeast)NCUBE2/PRO2121
G06Rn.2022NM_001012025UBXN4UBX domain protein 4UBXD2/UBXDC1
G07Rn.11946NM_053418UFD1LUbiquitin fusion degradation 1-like (yeast)UFD1
G08Rn.162227NM_133596UGCGL1UDP-glucose ceramide glucosyltransferase-like 1HUGT1
G09Rn.107678NM_019381BI-1Transmembrane BAX inhibitor motif containing 6Tmbim6
G10Rn.11790NM_001008301USP14Ubiquitin-specific peptidase 14 (tRNA-guanine transglycosylase)TGT
G11Rn.98891NM_053864VCPValosin-containing proteinIBMPFD/TERA
G12Rn.101044NM_001004210XBP1X-box binding protein 1TREB5/XBP2
H01Rn.973NM_001007604Rplp1Ribosomal protein, large, P1MGC72935
H02Rn.47NM_012583HprtHypoxanthine guanine phosphoribosyl transferaseHgprtase/Hprt1
H03Rn.92211NM_173340Rpl13aRibosomal protein L13ARpl13a
H04Rn.107896NM_017025LdhaLactate dehydrogenase ALdh1
H05Rn.94978NM_031144ActbActin, betaActx
H06N/AU26919RGDCRat genomic DNA contaminationRGDC
H07N/ASA_00104RTCReverse Transcription ControlRTC
H08N/ASA_00104RTCReverse transcription controlRTC
H09N/ASA_00104RTCReverse transcription controlRTC
H10N/ASA_00103PPCPositive PCR controlPPC
H11N/ASA_00103PPCPositive PCR controlPPC
H12N/ASA_00103PPCPositive PCR controlPPC