Review Article

Intestinal Microbiota as Modulators of the Immune System and Neuroimmune System: Impact on the Host Health and Homeostasis

Table 1

Profile of alterations in the gut microbiota in IBS, IBD, colorectal cancer, obesity, and type 2 diabetes.

DiseaseMicrobial alterationReference

Irritable bowel syndromeIncreased presence of Firmicutes, specifically Ruminococcus sp., Clostridium sp., and Dorea sp.; 
reduction in Bifidobacterium and Faecalibacterium spp.; 
decrease of Bacteroides in afflicted children;
increased presence of Dorea sp., Ruminococcus sp., Haemophilus sp. and parainfluenzae sp. in paediatric patients.
[911]

Inflammatory bowel diseaseReduced complexity of Firmicutesand Bacteroidetes, with decrease in the abundance of Clostridium leptum and Clostridium coccoides;
increase in bacteria of the Gammaproteobacteriaclass;
presence of adherent and invasive Escherichia coli;
decreased presence of Faecalibacterium prausnitzii;
altered abundance of members of the families Enterobacteriaceae, Ruminococcaceae, and Leuconostocaceae,with increased presence of Clostridium and reduced presence of Roseburia and Phascolarctobacterium.
[1214]

Colorectal cancerMembers of the genus Fusobacterium appear increased on colorectal cancerous tissue;
reduction in bacteria of the phyla Firmicutesand Bacteroidetes; 
alterations in number of butyrate producing bacteria (Coprococcus spp.; Eubacterium rectale; Roseburia spp.; and Faecalibacterium prausnitzii), related to the protective effect of butyrate for the enterocytes.
[15, 16]

ObesityDecreased presence of Bacteroidetes; 
increased presence of Actinobacteria.
[3, 17]

Type 2 diabetesOverall alterations of the microbiota;
increased presence of Clostridium spp.; Akkermansia muciniphila; Bacteroides spp.; and Desulfovibrio spp.
[18]

Ulcerative colitisDecreased presence of Firmicutes, Lentisphaerae, and Verrucomicrobia;
increased presence of Proteobacteria, Fusobacteria, and Spirochaetes.
[19]