Population-Sequencing as a Biomarker of Burkholderia mallei and Burkholderia pseudomallei Evolution through Microbial Forensic Analysis

Table 4

SNP calls for Burkholderia pseudomallei on chromosome 2. Progenitors are labeled 0_1 to 0_12. Clones from the 8th passage are labeled 8_𝑥_𝑦 to indicate their respective lineage (𝑥 = 1–12) and the number of clones selected for comparison (𝑦 = 1–6).

Genome position

Reference

0_1

0_2

0_3

0_4

0_5

0_8

0_10

0_11

0_12

8_1_1

8_1_2

8_1_3

8_1_4

8_1_5

8_1_6

8_3_1

8_5_1

8_6_1

8_8_1

8_9_1

8_10_1

8_11_1

8_12_1

16302

C

A

A

63867

T

C

C

112549

A

G

112589

A

G

125529

T

C

C

153871

C

A

A

255127

C

T

T

T

T

T

T

257976

A

289329

T

334349

G

A

A

371920

G

A

A

401983

C

T

T

429628

G

A

438505

A

G

G

446580

T

479883

T

G

482145

G

A

563692

A

G

G

568009

G

A

A

656370

C

A

673008

G

T

C

C

T

T

767675

C

T

T

767835

T

C

C

769495

C

A

770544

C

A

790672

C

A

A

793808

G

A

A

794151

G

A

A

794210

G

A

794352

G

T

794608

T

G

794942

G

A

A

821535

G

A

859546

A

G

G

859585

G

T

T