Journal of Pathogens / 2012 / Article / Tab 4

Research Article

Design and Construction of a Single-Tube, LATE-PCR, Multiplex Endpoint Assay with Lights-On/Lights-Off Probes for the Detection of Pathogens Associated with Sepsis

Table 4

Bacterial and fungal genomic DNA targets for 16S sepsis multiplex assay.

TargetAbbreviationAccession IDATCC Acquisition

Bacteria
 A. baumannii ABNC_01040017978D-5
 E. aerogenes EAHM48036115038D-5
 E. cloacae ECGU979185.113047D-5
 E. faecalis EFSNC_004668700802D-5
 E. faecium EFMAJ301830BAA-472D-5
 K. pneumoniae KPNC_011283BAA-1706D-5
 K. oxytoca KONR_041749.1Received from UC Davis
 P. aeruginosa PANC_00965617933D
 S. aureus SANC_002745Barry Kreiswirth PHRI
 S. epidermidis SENC_00297612228D-5
 S. haemolyticus SHX6610029970D-5
 S. saprophyticus SSEF522127.1Received from UC Davis
 S. hominis SHMX66101Received from UC Davis
 L. lactis (Control)CTLNC_008527Received from Smiths
Fungi
 C. albicans CAAF15384614053D-5
 C. parapsilosis CPGQ302972Received from UC Davis
 C. tropicalis CTAY942643Received from UC Davis
 C. glabratta CGAY942647Received from UC Davis