Review Article

Mixed Modeling with Whole Genome Data

Table 3

AFFECTED and VEGFC under a logistic model.

Model/parameter Estimate SE 𝑡 −2 log pseudolikelihood

Kinship 3434.4
𝜎 2 𝑃 1.3170 0.4376
 SEX −0.00822 0.2042 −0.04
 AGE 0.07181 0.006047 11.87
 SMOKE 0.9098 0.2285 3.98
Kinship + IBD3445.7
𝜎 2 𝑃 0.6918 0.5989
𝜎 2 𝑀 0.4868 0.3698
 SEX 0.006923 0.2048 0.03
 AGE 0.07211 0.006114 11.79
 SMOKE 0.9429 0.2290 4.12