Clustering-Based Method for Developing a Genomic Copy Number Alteration Signature for Predicting the Metastatic Potential of Prostate Cancer

Figure 3

A representative primary tumor chromosome 1 copy number profile (top panel) and corresponding 𝑆(CN)𝑛[𝑘={9,49,99}] in the bottom panels. Therefore, 𝑛=3 because three different smoothing lengths are used. Black probes represent probes that are not called while red probes are the called events that exceed the amplification and deletion thresholds.