| | Host Taxa | Supergroups | Strains | GeneBank # | References |
| | Subfamily | Genera | Species | | | wsp | |
| | Culicinae | Culex | Cx p. pipiens | B | wPip | AF020060 | Hertig and Wolbach 1924, Zhou et al., 1998 | | | | Cx p. quinquefasciatus | B | wPip | AF020061 | Zhou et al., 1998 | | | | Cx. brevipalpis | A | wBre | AF317477 | Ruang-Areerate et al., 2003 | | | | Cx. (Eumelanomyia) spp. | A | wEum | AF317480 | | | | Cx. fuscocephala | B | wFus | AF317481 | | | | Cx. Gelidus | B | wGel | AF317482 | | | | Cx (Lophoceraomyia) spp. | A | WLop | AF317490 | | | | Cx. sitiens | B | wSit | AF317491 | | | | Cx. modestus | B | wPip | - | Ricci et al., 2002 | | | | Cq. richiardii | B | wCon | - | | | | Cx. torrentium | B, C | wPip, wDi | - | | | Aedes | Ae. albopictus | A, B | wAlbA, wAlbB | AF020059, AF020059 | Wright and Wang 1980; Zhou et al., 1998 | | | | Ae. albotaeniatus | | wAlbo | AF317475 | Ruang-Areerate et al., 2003 | | | | Ae. craggi | | WCrag | AF317478 | | | | Ae. novoniveus | | wNov | AF317484 | | | | Ae. niveus | | wNiv | AF317485 | | | | Ae. pseudalbopictus, | | wPseu | AF317487 | | | | Ae. perplexus | | wPerp | AF317486 | | | | Ae. cooki | | | - | Yen 1975; Dean & Dobson (2004);
Takken & Koenraadt 2013 | | | | Ae. polynesiensis | | | - | | | | Ae. riversi | | | - | | | | Ae. cinereus | C | wDi | - | Ricci et al., 2002 | | | | Ae. detritus | C | wDi | - | | | | Ae. geniculatus | C | wDi | - | | | | Ae. punctor | B, C | wPip, wDi | - | | | | Ae. fluviatilis | B | wFlu | GQ981315 | Moreira et al., 2009 | | | | | | | | | | | Armigeres | Arm. subalbatus | A | wSub | AF317488 | Ruang-Areerate et al., 2003 | | | | | | | | | | Mansonia | Mn. uniformis | B | wUnif | AF317493 | | | | Mn. indiana | B | wInd | AF317492 | | | | | | | | | | Coquillettidia | Cq. crassipes | B | wCra | AF317479 | | | | | | | | | | Anophelinae | Anopheles | An. gambiae | A, B | wAnga-BF, wAnga-Mali | KJ728739-MF944223 | Baldini et al., 2014; Shaw et al., 2016; Gomes et al., 2017 | | | | An. coluzzii | A, B | wAnga-BF, wAnga-Mali | KJ728755-MF944223 | | | | An. arabiensis | A, B | wAnga | KJ728739- KJ728755 | Shaw et al., 2016 | | | | An. funestus | A, B | wAnfu | - | Niang et al., 2018 [68], Ayala et al., 2018 | | | | An. carnevalei | A,B | - | - | Ayala et al., 2018 | | | | An. coustani | B | - | - | | | | An. hancocki | B | - | - | | | | An. implexus | B | - | - | | | | An. jebudensis | B | - | - | | | | An. marshallii | B | - | - | | | | An. moucheti | B | - | - | | | | An. nigeriensis | B | - | - | | | | An. nili | B | - | - | | | | An. paludis | B | - | - | | | | An. vinckei | A,B | - | - |
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