Research Article

Genome-Wide Expression Profiling of Anoxia/Reoxygenation in Rat Cardiomyocytes Uncovers the Role of Mito in Energy Homeostasis

Table 4

Genes selected for RT-qPCR confirmation.

Gene namePrimer sequences (5′ to 3′)Reads number (RPKM, mean from 3 sequencings)
ForwardReverseConA/RDZDZ5HD

AcadlGGAATGAAAGCCCAGGACACAGTCAAACATGAACTCACAGGCAGAAA421.61 17.57 515.82 39.71
AldoaGGTGGTGTTGTGGGCATTAAGGTATGGCGAGGGACGAGGGAGTA1171.38 1358.29 1300.62 121.90
Ankrd1AAAATCAGTGCCCGAGACAAGCACCGAAGGTCATCAAGAGCCG2875.32 3262.76 215.95 2890.14
CatGGCACACTTTGACAGAGAGCGGCTGTGGAGAATCGGACGGCA143.64 11.32 149.61 152.13
CkmAACCCACAGACAAGCATAAGACCCTTCCACGGACAGCTTCTCTACA862.02 929.51 903.35 139.07
CluACTCAGAAGTCCCCTCTCGTGTTTTCCTGCGGTATTCCTGTAGC1009.00 1068.16 73.26 1050.66
CycsAAGCATAAGACTGGACCAAACCTCGTGATACCTTTGTTCTTGTTGGCAT230.49 289.74 129.06 283.52
Epas1ACCTTCCCAGCCACCATCTACCACTTGCCACTCCTGACCCCTTT10.16 10.53 10.68 1.89
Got2GGGACTGGCTGATTTTTGTAAGGCAGAAAGACATCTCGGCTGAACT241.93 277.84 54.72 275.22
GpiACCCAGGAGACCATCACCAACCTACCCAATCCCAGAACTCGAAC137.57 10.77 146.16 141.82
GsrGTTGTGTTTTTCTTGCTTTGGCGGAGGATTCTGAGTTGTTTGAGG15.80 21.76 4.91 22.58
Hspa5ACACTTGGTATTGAAACTGTGGGAGCTTGATTGTTACGGTGGGCTG132.59 171.78 157.12 27.08
Idh2CCCATCACCATTGGCAGACACCCTCCGGCAGGGAAGTTATACA718.92 25.15 816.33 60.47
Idh3BATTCGAGAACAGACAGAAGGGGAGTCTCTGAGACTTGGTTCGAGTGACG170.23 210.25 28.79 205.45
LdhbACCAGAAGCTGAAGGACGATGAGTGACCTACGTACAAGGCCGAAGA1337.06 1599.30 1535.85 106.07
Mdh1TCTCCTCCGCATGACTACACAGTAGATCGCAGCACTAACAACGT445.93 17.92 513.76 130.68
Mgst3AAAGCCCGCAAGAAGTACAAGGTCACGGTTAGGAAGAATAGGAAGGG175.29 183.50 178.22 75.55
MifTATTACGACATGAACGCAGCCAATCAAACCATTTATTTCTCCCGACC75.60 19.21 82.05 22.40
Oxct1ATTGTAGACATTGGCTCGTTTGCTCTTGGCTTTTCCTTCACCTTCCTTT224.68 10.00 303.23 43.54
Pdk4CAAGTCAGCCTTCAAACATTATCAAAACAAGAGTCCACACACATTCA184.97 14.36 193.38 32.08
Psmd7AAGAGCGATGCGAAGAAAGAGGAAAGGGTGACCAGGGCAGAGAG74.87 82.47 13.07 59.27
SdhaCTCTTTCCTACCCGCTCACATACTGTCATAGAAATGCCATCTCCAG209.87 17.69 263.44 254.47
SdhbTCAACGGAGGCAACACGCTGCATAGAAGTTACTCAAGTCAGGGA378.70 425.40 36.17 419.09
Sod1GGCTTCTGTCGTCTCCTTGCTTCTGGTTCACCGCTTGCCTTCT186.25 21.37 199.90 198.85
Uba52ACCCTGTCCGACTACAACATCCATGTACTTCTGGGCAAGCTGACGA618.42 23.57 556.13 51.39