Process Number of DEGs in control OXYS rats Percentage of DEGs removed by SkQ1 Gene symbols BP Mitochondrion organization 11 91 Sept4 , Mfn1 , Spg7 , Samm50 , Jun , Mtx1 , Tomm40 , Bnip3 , Bcl2l1 , Synj2bp , Dap3 Generation of precursor metabolites and energy 11 91 Atp6v0c , Atp5d , Uqcrc1 , Pfkl , Hk2 , Atp5c1 , Hk1 , Cyb5b , Cat , Atp5h , Etfb Oxidation reduction 15 80 Cyb5r3 , Me3 , Uqcrc1 , Cyb5b , Por , Gsr , Ivd , Ndufv1 , Akr7a2 , Cat , Alkbh3 , Acad11 , Mecr , Etfb , Prodh Oxidative phosphorylation 5 80 Atp6v0c , Atp5d , Uqcrc1 , Atp5c1 , Atp5h Mitochondrial transport 4 100 Mtx1 , Tomm40 , Bnip3 , Bcl2l1 Apoptotic mitochondrial changes 3 100 Jun , Bcl2l1 , Dap3 MF Coenzyme binding 10 90 Cyb5r3 , Gsr , Acbd3 , Me3 , Ivd , Ndufv1 , Cat , Parp1 , Acad11 , Por Nucleotide binding 28 71 Hsp90ab1 , Cyb5r3 , Sept4 , Me3 , Fastkd1 , Spg7 , Abca9 , Hk2 , Hk1 , Acsf2 , Gsr , Ivd , Slc22a4 , Abcb10 , Cat , Actb , Pdk2 , Alpk1 , Pfkl , Por , Atad1 , Acsm3 , Trap1 , Hyou1 , Mfn1 , Ndufv1 , Acad11 , Parp1 Electron carrier activity 7 86 Cyb5r3 , Gsr , Ivd , Cyb5b , Acad11 , Etfb , Por CC Mitochondrion 66 76 Hsp90ab1 , Cyb5r3 , Atp5d , Spg7 , Uqcrc1 , Aurkaip1 , Nit1 , Nit2 , Bnip3 , Clybl , Acsf2 , Gsr , Acbd3 , Dnajc15 , Mutyh , Dnajc11 , Slc25a22 , Akr7a2 , Exog , Abcb10 , Cat , Atp5h , Abce1 , Fech , Pisd , Synj2bp , Cyb5b , Mrm1 , Por , Trap1 , Mfn1 , Slc25a34 , Atp5c1 , Mecr , Prodh , Me3 , Atp5sl , Abca9 , Samm50 , Mtx1 , Hk2 , Sfxn4 , Hk1 , Letm2 , Wars2 , Bcl2l1 , Mrpl11 , Ivd , Slc25a46 , Etfb , Pdk2 , Mobp , Tomm40 , Atad1 , Acsm3 , Mrpl22 , Adap2 , Hmgcs2 , Tfrc , Ndufv1 , Gls , Bola1 , Alkbh3 , Acad11 , Dap3 , Comtd1 Mitochondrial outer membrane 11 100 Cyb5r3 , Mfn1 , Samm50 , Mtx1 , Hk2 , Hk1 , Tomm40 , Bnip3 , Bcl2l1 , Cyb5b , Synj2bp Mitochondrial inner membrane 15 80 Cyb5r3 , Atp5d , Uqcrc1 , Samm50 , Letm2 , Cyb5b , Hmgcs2 , Slc25a34 , Ndufv1 , Dnajc11 , Slc25a22 , Atp5c1 , Slc25a46 , Abcb10 , Atp5h Mitochondrial matrix 12 92 Mrpl11 , Atp5d , Acsm3 , Pdk2 , Fech , Hmgcs2 , Ivd , Gls , Atp5c1 , Wars2 , Etfb , Dap3