Research Article

Investigations on Binding Pattern of Kinase Inhibitors with PPARγ: Molecular Docking, Molecular Dynamic Simulations, and Free Energy Calculation Studies

Figure 4

Molecular dynamics simulation of PPARγ-ligand complexes. (a) RMSD of human PPARγ backbone structure docked with KIs and cocrystalized compounds rosiglitazone in 25 ns simulation. (b) SASA of human PPARγ-KI and of human PPARγ-rosiglitazone complexes in 25 ns simulation.
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