Research Article

To Probe Full and Partial Activation of Human Peroxisome Proliferator-Activated Receptors by Pan-Agonist Chiglitazar Using Molecular Dynamics Simulations

Figure 4

Average root mean square deviation (RMSD) plot for the three MD simulation runs of each protein-ligand complex over the length of the trajectory. The Cα-RMSD for the protein (shown in blue) and ligand RMSD (shown in red) is based on the initial protein alignment.