Review Article

Position Weight Matrix, Gibbs Sampler, and the Associated Significance Tests in Motif Characterization and Prediction

Figure 1

What Gibbs sampler does. The intron sequences in the top panel represent the input information to the Gibbs sampler. The bottom panel represents part of the output showing the identified motif (i.e., TAATAAC, in red) shared among the sequences. Output from DAMBE [53, 54]. The input intron sequence file (YeastAllIntron.fas) is in DAMBE installation directory in FASTA format.
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