Construction of Gene Regulatory Networks Using Recurrent Neural Networks and Swarm Intelligence

Table 2

Results of the E. coli experiments with all the available time points.

Dataset	TP	TN	FP	FN	TPR	SPC	FPR	FNR	PPV	FDR	ACC	1-score	Graph edges	MSE	CPU time
BAPSO_full
1	7	46	9	2	0.78	0.84	0.16	0.22	0.44	0.56	0.83	0.56	16	0.0157	16.9 m
2	7	40	15	2	0.78	0.73	0.27	0.22	0.32	0.68	0.73	0.45	22	0.0114	16.9 m
3	7	45	10	2	0.78	0.82	0.18	0.22	0.41	0.59	0.81	0.54	17	0.0147	16.9 m
4	4	43	12	5	0.44	0.78	0.22	0.56	0.25	0.75	0.73	0.32	16	0.0147	16.9 m
BAPSO_half
1	7	38	17	2	0.78	0.69	0.31	0.22	0.29	0.71	0.70	0.42	24	0.0042	9.1 m
2	8	40	15	1	0.89	0.73	0.27	0.11	0.35	0.65	0.75	0.50	23	0.0025	9.2 m
3	6	43	12	3	0.67	0.78	0.22	0.33	0.33	0.67	0.77	0.44	18	0.0048	9.1 m
4	4	40	15	5	0.44	0.73	0.27	0.56	0.21	0.79	0.69	0.29	19	0.0039	9.1 m