Toxoplasma gondii-Induced Long-Term Changes in the Upper Intestinal Microflora during the Chronic Stage of Infection

Table 1

Relative abundance of each phyla in acute group and the first chronic cohort.

Phylum	Acute				Chronic
	Uninfected^a	Infected^a	value^b	value^c	Uninfected^a	Infected^a	value^b	value^c
Bacteroidetes	0.19	6.81	<0.01	<0.01	0.24	0.74	0.08	0.14
Firmicutes	86.04	64.57	0.15	0.25	99.04	98.06	0.06	0.14
Proteobacteria	8.81	20.02	0.32	0.37	0.36	0.20	0.28	0.33
Verrucomicrobia	3.86	6.44	0.70	0.70	0.01	0.15	<0.01	0.01
Deferribacteres	0.27	0.03	0.11	0.25	ND	ND	ND	ND
Actinobacteria	0.21	0.08	0.18	0.25	0.06	0.09	0.46	0.46
Others	0.63	2.05	0.01	0.03	0.28	0.76	<0.01	0.01

^aUnits displayed as percentage for relative abundance. ^bNegative binomial test was used to calculate values. ^c values were FDR-corrected p values.