Table of Contents
Sequencing
Volume 2010 (2010), Article ID 782465, 12 pages
http://dx.doi.org/10.1155/2010/782465
Research Article

Identification and Quantification of Genomic Repeats and Sample Contamination in Assemblies of 454 Pyrosequencing Reads

Department of Biology, Centre for Ecological and Evolutionary Synthesis (CEES), University of Oslo, P.O. Box 1066 Blindern, 0316 Oslo, Norway

Received 26 May 2009; Revised 28 September 2009; Accepted 5 November 2009

Academic Editor: Nick Loman

Copyright © 2010 Alexander J. Nederbragt et al. This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.

Supplementary Material

The Supplementary Material contains target regions and primers for the real-time PCRs (Supplementary Table I), Annotation of the high read depth contigs for all bacterial genomes assemblies (Supplementary Table II and III) and a figure with the per-contig copy number estimates for the P. rubescens and A. flos-aqua contigs (supplementary Figure 1).

  1. Supplementary Material