Research Article

Implementation of an Agent-Based Parallel Tissue Modelling Framework for the Intel MIC Architecture

Table 1

OpenMP scalability of two stages of simulations in Timothy.

Threads per nodeComputing potential seconds (speedup)Computing gradient seconds (speedup)

157.7564.02
229.91 (1.93x)37.73 (1.70x)
416.27 (3.55x)22.55 (2.84x)
88.64 (6.68x)12.11 (5.29x)
164.85 (11.91x)6.59 (9.71x)
32 (SMT2)2.90 (19.91x)3.88 (16.5x)
64 (SMT4)1.99 (29.02x)2.78 (23.03x)