Genetic Variation and Population Structure in Jamunapari Goats Using Microsatellites, Mitochondrial DNA, and Milk Protein Genes
Table 2
Bottleneck detection in the Jamunapari goats.
Marker
Heq*
SD
*(He-Heq)/SD
He excess
M ratio*
BM4621
0.894
.021
−1.825
+
0.833
NRAMP
0.834
.036
−0.886
+
0.692
OarAE101
0.787
.050
0.337
−
0.889
IDVGA7
0.894
.021
−0.436
+
0.938
ILSTS005
0.441
.151
0.364
−
0.364
BM6526
0.808
.048
−0.244
+
0.692
ETH225
0.714
.074
−0.159
+
0.857
OarHH56
0.813
.043
−0.007
+
0.857
INRABERN192
0.833
.038
−0.359
+
0.625
OarFCB48
0.784
.053
0.845
−
1.00
OarHH62
0.653
.093
0.672
−
0.833
TGLA40
0.831
.041
−1.275
+
0.769
BM143
0.786
.053
−0.934
+
0.667
SRCRSP5
0.786
.052
0.051
−
0.800
SRCRSP6
0.830
.037
−4.182
+
0.909
SRCRSP9
0.849
.034
0.763
−
0.846
SRCRSP10
0.813
.041
0.393
−
1.000
*Heq is the heterozygosity expected at equilibrium obtained through coalescent simulation under the “two-phase mutation model”. (He-Heq)/SD: the standardized difference for each locus, M ratio: the number of allele/(range in allele size + 1).
