Research Article
Extracting Physicochemical Features to Predict Protein Secondary Structure
Table 9
Comparisons between ours and other methods.
| | Methods | | SOV94 | SOV99 | R(H) | R(E) | R(C) |
| | PHD (RS126) [7] | 70.8 | 73.5 | — | 72.0 | 66.0 | 72.0 | | SVMfreq (RS126) [5] | 71.2 | 74.6 | — | 73.0 | 58.0 | 73.0 | | SVMfreq (CB513) [5] | 73.5 | 76.2 | — | 75.0 | 60.0 | 79.0 | | PMSVM (CB513) [4] | 75.2 | 80.0 | — | 80.4 | 71.5 | 72.8 | | SVMpsi (RS126) [6] | 76.1 | 79.6 | 72.0 | 77.2 | 63.9 | 81.5 | | SVMpsi (CB513) [6] | 76.6 | 80.1 | 73.5 | 78.1 | 65.6 | 81.1 | | Ours without filtering (CB513) | 77.40 | 90.20 | 71.10 | 78.98 | 64.45 | 82.43 | | Ours with filtering (CB513) | 79.52 | 86.10 | 74.60 | 76.91 | 65.60 | 88.31 |
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