Molecular and Virological Investigation of a Focal Chikungunya Outbreak in Northern India

Table 2

Quantification of Chikungunya viral RNA in clinical samples and mosquito pools by qRT-PCR.

Sample ID*	Quantification of CHIKV RNA (copies/mL)	Ct value
DRDE10_GWL1	10^2.644	28.12
DRDE10_GWL2	10^2.769	27.72
DRDE10_GWL3	10^2.823	27.55
DRDE10_GWL4	10^4.332	22.73
DRDE10_GWL5	10^2.769	27.72
DRDE10_GWL6	10^2.904	27.29
DRDE10_GWL7	10^2.863	27.42
DRDE10_GWL8	10^2.716	27.89
DRDE10_GWL9	10^2.506	28.56
DRDE10_GWL10	10^2.819	27.56
DRDE10_GWL11	10^2.754	27.77
DRDE10_GWL12	10^6.761	14.97
DRDE10_GWL13	10^3.712	24.71
DRDE10_GWL14	10^2.722	27.87
DRDE10_GWL15	10^5.766	18.15
DRDE10_GWL16	10^6.492	15.83
DRDE10_GWL1M	10^3.270	26.12
DRDE10_GWL2M	10^2.910	27.27

∗The sample ID with a suffix M refers to the mosquito samples.