Research Article

Characterisation and In Silico Analysis of Interleukin-4 cDNA of Nilgai (Boselaphus tragocamelus) and Indian Buffalo (Bubalus bubalis)

Table 1

Possible N-glycosylation sites and amino acid substitutions in various species with respect to nilgai IL4 protein.

SpeciesPossible N-glycosylation sites in IL4Nonsynonymous nucleotide substitution leading to amino acid change with position with respect to nilgai IL4
Total numberPosition (s)

Nilgai0162Taken as standard for comparison
Cattle 0162A22V, A72V, G123R
African buffalo0162A22V, A72V, G123R
Indian buffalo0162F21L, A22V, A72V, A101V, S113G, G123R
Goat0262 and 96Y5S, V10A, A22V, A32E, T37M, T43S, R44Q, T63A, S82N, T84M, N98S, K118R, G123R
Sheep0262 and 96Y5S, V10A, A22V, A32E, L38P, T43S, R44Q, V53A, T63A, A72T, T84M, N98S, K118R, G123R, K129R
Pig0362, 96 and 102Y5S, V10T, V16A, H20N, A22V, A32Q, T43A, A54T, K61E, G73S, I74T, E75V, R78H, S82H, L96M, N97K, K98S, F99L, G91S, N98S, L100M, S102N, K103M, N108H, L120F, G123R
Red deer0262 and 96Y5S, V16A, A22V, A32E, T43A, F69L, K98R, G91S, G92R, N108S, S109G, D119N, G123R
Camel0462, 96, 102 and 108P9S, V10T, H20N, A32Q, I40T, P52T, R71K, G73A, I74T, E75A, R78H, S82H, T84N, N87S, F89H, G90S, N98S, S99G, S102N, K103T, E109D, A110S, K118R, L120F, G123R, T126K
Giraffe0262 and 96V16A, A22V, C27R, A32E, T43A, G73A, I74T, T84M, K98R, G91S, N98S, E109G, G123R
Bison0162A22V, A72V, G123R
Llama0462, 96, 102 and 108Y5S, V10T, H20N, A32Q, I40T, T43A, P52T, R71K, G73A, I74T, E75A, R78H, S82H, T84N, N87S, F89H, G91S, N98S, S99G, S102N, K103T, E109D, A110S, K118R, L120F, G123R, T126K
Cat0628, 45, 62, 84, 96 and 102G2D, Y5S, V10A, V16A, C17F, H20T, A22V, H25Q, K26N, C27F, D28N, I29N, A32K, T43A, K45N, N46D, P52T, A54M, F57L, T64S, E65D, T68I, G73T, I74T, E75V, R78Q, R81T, T84N, L86S, N87T, G91K, S92H, N98S, L100M, S102N, K101R, A110V, S115C, L120F, G123R, T126A, K129Q, E130K, C135H
Dog0628, 45, 62, 83, 95 and 101Y5S, V10A, V16A, C17L, H20T, A22V, K26N, C27F, D28N, L31I, A32K, T37M, T43A, K45N, N46D, P52T, A54K, A58T, T64S, E65D, T68I, G73A, I74T, E75V, R78Q, R81T, T84N, L86S, K88R, F89Y, G91R, D94Y, N98S, L100M, S102N, V107M, A110I, L120F, G123R, T126V, K129Q, E130K, S133Y, K134R, C135H
Bottle-nosed dolphin0362, 96 and 102Y5S, V10M, V16A, H20N, A22V, I29V, A32Q, T43A, R44K, S47L, A54E, A59T, P60T, I74T, E75V, R78H, S82H, T84K, L86F, K98Q, F99P, G101S, D104H, N108S, L110M, S112N, K113M, L120F, G123R, T126M