Annotation of Differentially Expressed Genes in the Somatic Embryogenesis of Musa and Their Location in the Banana Genome

Table 2

Annotation of differentially expressed genes during different stages of somatic versus zygotic embryogenesis in Musa acuminata ssp. malaccensis and their location in the chromosomes of banana genome.

TDF number; (base pairs)	Hit to the Musa chromosome no.	𝐸 value	% identity	Protein	Embryogenesis stage
7-1-2 (88 )	6	9𝐸−21	95.24	CTP synthase 2	MZE
7-1-4 (71)	5	4𝐸−13	97.62	Serine/threonine-protein kinase	ECS
17-1-5 (299)	All	2𝐸−55	99.12	—	MSE, MZE
24-2-1 (286)	6	5𝐸−56	99.0	1,4-α-glucan-branching enzyme 2 chloroplastic/amyloplastic ~SBE1	All stages of somatic embryogenesis
35-2-3 (225)	1	1𝐸−107	99.5	—	IZE
43-1-1 (163)	10	8𝐸−66	99.24	—	IZE
46-5-4 (119)	All	2𝐸−22	89.36	Putative signal peptide peptidase-like 3	All stages of somatic embryogenesis
47-1-2 (148)	7	3𝐸−59	100	—	MSE
47-1-4 (149)	All (6)	3𝐸−25	87.83	—	MSE
47-1-5 (192)	4	8𝐸−11	92.16	Early-responsive to dehydration protein-related	MSE
58-1-2 (94)	4	6𝐸−16	96.08	Early-responsive to dehydration protein-related,	ECS
58-1-3 (88)	6	9𝐸−21	95.24	CTP synthase 2	ECS
60-1-3 (71)	5	4𝐸−13	97.62	Serine/threonine-protein kinase	ECS
60-5-4 (120)	6	3𝐸−18	90.67	Putative BSD domain containing protein	ECS
60-5-7 (116)	7	2𝐸−44	100	Probably the indole-3-acetic-acid-amido synthetase GH3.1	ECS

MZE and MSE: matured zygotic and somatic embryo, IZE: immature zygotic embryo; ECS: embryogenic cell suspension.