CMYB1 Encoding a MYB Transcriptional Activator Is Involved in Abiotic Stress and Circadian Rhythm in Rice
Table 1
Predicted cis-elements in the promoter region of CMYB1.
Element name
Element sequencea
Positionb
ABA response elements (ABRE)
tctgatgaCGTGgaccg
−1441–−1425
tggcctgaCGTGtcaaa
−988–−972
cacgataaGGTGgccct
−688–−652
gagtcctACGTggcgcg
−264–−248
Auxin response element (AuxRE)
ttaTGTCcccgtc
−1422–−1410
Brassinosteroid response element (BRRE)
cctgaCGTGtcaaaaaa
−985–−969
gcgctCGTGtggacggg
−914–−898
Ethylene response element factors (ERE)
aGCGAaagtcccaaagtcc
−964–−946
GCC box family (GCC)
gagtccCGCCatg
−1270–−1258
Heat shock element (HSE)
gcgattTTTCgtgaatt
−1205–−1189
gaaaaaaataaAGAAaa
−368–−352
NAC transcription factor recognition site
ttctttactccccgcCACGtcatcccc
−1368–−1342
tagtgcgacggggccTACGtaacgctc
−205–−179
Salt/drought responsive element
gttcgGTGGtggatt
−1039–−1025
Circadian LELHC
catCAAcaacATCgag
−123–−108
The capital letters represented the core sequence in the predicted cis-element.
bPosition displayed the nucleotide position relative to the up-stream of ATG of CMYB1.