Research Article

Molecular Phylogeny and Predicted 3D Structure of Plant beta-D- -Acetylhexosaminidase

Table 1

Proteins sequences used for construction of phylogenetic studies.

SLGI numberName used in the treeDescriptionOrganismTaxonomy

1.4261632Homo sapiens-Abeta-Hexosaminidase subunit-A, HexAHomo sapiens Eukaryota (Primates)
2.426379627Gorilla gorilla gorillabeta-Hexosaminidase subunit alpha isoform 1Gorilla gorilla gorilla //
3.329112561Pongo abelii-APredicted beta-hexosaminidase Subunit-APongo abelii //
4.332844225Pan troglodytes-Abeta-Hexosaminidase Subunit-A isoform_8Pan troglodytes //
5.387849165Macaca mulatta-Abeta-Hexosaminidase Subunit-A precursorMacaca mulatta //
6.402874775Papio anubis-Abeta-Hexosaminidase Subunit-A isoform_1Papio anubis //
7.635134633Chlorocebus sabaeus-Abeta-Hexosaminidase subunit alpha isoform X5Chlorocebus sabaeus //
8.296213630Callithrix jacchus-Abeta-Hexosaminidase Subunit-A isoform_1Callithrix jacchus //
9.640780361Tarsius syrichta-Abeta-Hexosaminidase subunit-A isoform X1Tarsius syrichta //
10.441617200Nomascus leucogenys-APredicted beta-hexosaminidase subunit-ANomascus leucogenys //
11.867691Homo sapiens-Bbeta-Hexosaminidase subunit-B, HexBHomo sapiens //
12.114599673Pan troglodytes-Bbeta-Hexosaminidase subunit beta isoform 5Pan troglodytes //
13.297675458Pongo abelii-BPredicted beta-hexosaminidase subunit betaPongo abelii //
14.635028815Chlorocebus sabaeus-BPredicted beta-hexosaminidase subunit betaChlorocebus sabaeus //
15.388454685Macaca mulatta-Bbeta-Hexosaminidase subunit betaMacaca mulatta //
16.402871850Papio Anubis-BPredicted beta-hexosaminidase subunit betaPapio anubis //
17.296194339Callithrix jacchus-Bbeta-Hexosaminidase subunit beta isoform 1Callithrix jacchus //
18.403256462Saimiri boliviensis-BPredicted beta-hexosaminidase subunit betaSaimiri boliviensis //
19.478492476Ceratotherium simum-BPredicted beta-hexosaminidase subunit betaCeratotherium simum //
20.17647501Drosophila melanogaster-1beta-Hexosaminidase, Hex1Drosophila melanogaster Eukaryota (Insect)
21.557771663Musca domestica1beta- -Acetylglucosaminidase-like isoform X1 Musca domestica //
22.498964043Ceratitis capitata1beta- -Acetylglucosaminidase-like isoform X1Ceratitis capitata //
23.498931058Ceratitis capitata1-1beta- -Acetylglucosaminidase-like isoform X1Ceratitis capitata //
24.157106934Aedes aegypti1beta-HexosaminidaseAedes aegypti //
25.170057261Culex quinquefasciatus1beta- -AcetylglucosaminidaseC. quinquefasciatus //
26.508082176Spodoptera frugiperdaLysosomal beta-hexosaminidaseSpodoptera frugiperda //
27.294988604Agrotis ipsilonbeta- -Acetyl hexosaminidaseAgrotis ipsilon //
28.19072855Trichoplusia nibeta- -Acetyl hexosaminidaseTrichoplusia ni //
29.62722476Choristoneura fumiferanabeta- -Acetyl hexosaminidaseChoristoneura fumiferana //
30.114842947Ostrinia furnacalis1beta- -AcetylglucosaminidaseOstrinia furnacalis //
31.37678109Manduca sextabeta- -AcetylglucosaminidaseManduca sexta //
32.17933586Drosophila melanogaster-2beta-Hexosaminidase, Hex2Drosophila melanogaster //
33.557764625Musca domestica2beta- -Acetylglucosaminidase-likeMusca domestica //
34.499003284Ceratitis capitata2beta- -Acetylglucosaminidase-likeCeratitis capitata //
35.157117066Aedes aegypti2beta- -Acetyl hexosaminidaseAedes aegypti //
36.642910295Tribolium castaneumbeta- -Acetyl hexosaminidase isoform X1Tribolium castaneum //
37.170029661Culex quinquefasciatus2beta- -Acetylglucosaminidase-likeC. quinquefasciatus //
38.157804574Ostrinia furnacalis2beta- -Acetyl hexosaminidaseOstrinia furnacalis //
39.145651816Bombyx moribeta- -Acetyl hexosaminidase precursorBombyx mori //
40.350540008Solanum lycopersicum2beta-Hexosaminidase1Solanum lycopersicum Eukaryota (planta)
41.565386664Solanum tuberosum2Predicted beta-hexosaminidase 2-like Solanum tuberosum //
42.315440799Capsicum annuum2beta- -AcetylhexosaminidaseCapsicum annuum //
43.225450263Vitis vinifera2Predicted beta-hexosaminidase-likeVitis vinifera //
44.449532074Cucumis sativus2Predicted beta-hexosaminidase 2-likeCucumis sativus //
45.255581813Ricinus communisPutative beta-hexosaminidaseRicinus communis //
46.440355382Prunus persica2beta-Hexosaminidase 2Prunus persica //
47568858509Citrus sinensis2Predicted beta-hexosaminidase 2-likeCitrus sinensis //
48.15220590Arabidopsis thaliana2beta-Hexosaminidase 2Arabidopsis thaliana //
49.568879684Citrus sinensis3Predicted beta-hexosaminidase 2-likeCitrus sinensis //
50.356528621Glycine max2Predicted beta-hexosaminidase 2-likeGlycine max //
51.357116549Brachypodium distachyon2Predicted beta-hexosaminidase 2-likeBrachypodium distachyon //
52.30694211Arabidopsis thaliana1beta-Hexosaminidase 1Arabidopsis thaliana //
53.567186303Eutrema salsugineumHypothetical ProteinEutrema salsugineum //
54.449459940Cucumis sativus1Predicted beta-hexosaminidase 1-likeCucumis sativus //
55.356568953Glycine max1Predicted beta-hexosaminidase 1-likeGlycine max //
56.401065909Prunus persica1beta-HexosaminidasePrunus persica //
57.565358237Solanum tuberosum1Predicted beta-hexosaminidase 1-likeSolanum tuberosum //
58.350538741Solanum lycopersicum1Predicted beta-hexosaminidase 2Solanum lycopersicum //
59.357134815Brachypodium distachyon1beta-Hexosaminidase subunit- B2-like isoformBrachypodium distachyon //
60.573945166Oryza brachyanthaPredicted beta-hexosaminidase 1-likeOryza brachyantha //
61.115461737Oryza sativaPutative beta-hexosaminidase Oryza sativa //
62.169766420Aspergillus oryzaebeta- -AcetylglucosaminidaseAspergillus oryzae Eukaryota (Fungi)
63.238483137Aspergillus flavusPutative beta- -Acetylhexosaminidase Aspergillus flavus //
64.115491163Aspergillus terreusPutative beta-hexosaminidase precursorAspergillus terreus //
65.119484544Neosartorya fischeriPutative beta-hexosaminidaseNeosartorya fischeri //
66.145241784Aspergillus nigerPredicted -acetylglucosaminidaseAspergillus niger //
67.70983560Aspergillus fumigatusPredicted beta- -acetylhexosaminidaseAspergillus fumigatus //
68.358375826Aspergillus kawachii-1beta- -AcetylhexosaminidaseAspergillus kawachii //
69.121719823Aspergillus clavatusPutative beta- -acetylhexosaminidaseAspergillus clavatus //
70.358372216Aspergillus kawachii-2beta- -Acetylhexosaminidase precursorAspergillus kawachii //
71.525585306Penicillium oxalicumPutative beta-1,6- -acetylglucosaminidasePenicillium oxalicum //
72.557727225Byssochlamys spectabilisPutative beta- -acetylhexosaminidaseByssochlamys spectabilis //
73.13786695Streptomyces Plicatusbeta- -Acetylhexosaminidase, SpHexStreptomyces Plicatus Prokaryote (Bacteria)
74.494714113Streptomyces coelicoflavusPredicted beta-hexosaminidaseStreptomyces coelicoflavus //
75. 511095822Streptomyces lividansPutative beta-hexosaminidase precursorStreptomyces lividans //
76.490099150Streptomyces viridochromogenes1Putative beta-hexosaminidaseStreptomyces viridochromogenes //
77.499338878Streptomyces coelicolor1Putative beta-hexosaminidaseStreptomyces coelicolor //
78.640930344Streptomyces olindensisPredicted beta-hexosaminidaseStreptomyces olindensis //
79.493092893Streptomyces gancidicusPredicted beta-hexosaminidaseS. gancidicus //
80.594145706Streptomyces coelicolor2beta-HexosaminidaseStreptomyces Coelicolor //
81.505473521Streptomyces davawensisbeta- -AcetylhexosaminidaseStreptomyces davawensis //
82.490088482Streptomyces viridochromogenes2beta- -AcetylhexosaminidaseStreptomyces viridochromogenes //
83.119720203Thermofilum pendensGlycoside hydrolase family proteinThermofilum pendens Archea

Bold font indicates the experimentally characterized beta- -acetylhexosaminidases.