Rule-Based Knowledge Acquisition Method for Promoter Prediction in Human and Drosophila Species

Table 5

Comparisons of training and test accuracies (ACC, %), sensitivity (SN), specificity (SP), and MCC for the HP dataset.

Method	No. of used features (𝐶, 𝛾)	10-CV HPL				Independent test HPT
		ACC	SN	SP	MCC	ACC	SN	SP	MCC
SVM-GSD	36 (2^8, 2^−2)	97.4	0.972	0.976	0.949	93.6	0.930	0.941	0.872
SVM-4mer	128 (2^3, 2^−3)	94.2	0.949	0.936	0.885	91.0	0.953	0.867	0.823
SVM-RBS	82 (2^7, 2^−5)	96.0	0.964	0.956	0.920	91.9	0.885	0.962	0.840
PromHD	99 (2^7, 2^−5)	98.9	0.979	0.979	0.979	96.4	0.967	0.960	0.927