Gene Network Biological Validity Based on Gene-Gene Interaction Relevance

Table 2

Most representative results found using our method assessing some yeast cell cycle networks. The results from GeneNetVal and the Hits levels 1 and 2 obtained from the evaluation are shown. Note that all similarities found with the KGN are also found for the cell cycle pathways network as expected.

	Nariai et al. [26]			Gallo et al. [27]
KGN	0.852	35	5	0.65	4	5
sce04111	0.852	35	5	0.65	4	5
sce04113	0.81	22	3	0.4	2	2
	Bulashevska and Eils [28]			Ponzoni et al. [29]
KGN	0.542	4	5	0.647	6	10
sce04111	0.458	4	3	0.618	6	9
sce04113	0.2	0	2	0.417	1	1