The Scientific World Journal / 2014 / Article / Tab 2 / Research Article
Identification, Cloning, and Expression of L-Amino Acid Oxidase from Marine Pseudoalteromonas sp. B3 Table 2 Conserved regions of LAAOs from Pseudoalteromonas microorganisms used for design of degenerate primers.
Item Accession no. Sequences ofa Region 1 Region 2 Region 3 Pseudoalteromonas haloplanktis TAC125YP_339251 13IIGSGAA AGLS22 225AMAWRAG C232 359MTDFNGK TDL368 Pseudoalteromonas tunicata D2ZP_01132853 13IIGSGAA AGLS22 224AMAWRAG C231 357MTDFNGK TDL366 Pseudoalteromonas atlantica T6cYP_662716 13IIGSGAA AGLS22 222AMAWRAG C230 359VTDFNAK TDL368 Pseudoalteromonas sp. SM9913YP_004069407 13IIGSGAA AGLS22 225AMAWRAG C232 359MTDFNGK TDL368 Degenerate primerb ZZ-2: 5′-ATTATHGGYAGCGGCGC-3′ ZZ-3: 5′-GCHATGGCDTGGCGTGC-3′ ZF-2: 5′-CCHGCACGCCAHGCCAT-3′ ZF-3: 5′-TDSCATTAAAGTCRGTC-3′
Boldface letters indicate the specific amino acids actually used in the design of the degenerate primers (forward primers: ZZ-2 and ZZ-3; reverse primers: ZF-2 and ZF-3).