BioMed Research International / 2016 / Article / Tab 4 / Research Article
Genetic Structure and Drug Susceptibility Patterns of Mycobacterium tuberculosis Complex Strains Responsible of Human Pulmonary Tuberculosis in the Major Rearing Region in Cameroon Table 4 MTBC population structure comparison between Adamaoua and West region in Cameroon.
Spoligotype profiles SIT Lineage Strains number Adamaoua West region 523 U 2 0 Orphan AFRI_2 1 0 Orphan ND 1 0 53 T1 34 46 □ 7 T1 2 0 498 T1 1 0 2577 T1 1 0 118 T2 0 9 119 X1 1 0 Orphan ND 0 1 44 T5 0 4 1913 T5 0 2 Orphan ND 1 0 Orphan ND 0 1 42 LAM_9 0 2 20 LAM1 4 5 93 LAM_5 0 1 17 LAM_2 0 1 150 LAM_9 0 4 Orphan ND 0 1 774 T1 2 1 61 Cameroon 223 184 Orphan Cameroon 0 1 Orphan Cameroon 0 1 Orphan Cameroon 2 0 Orphan Cameroon 0 1 115 Cameroon 2 18 Orphan Cameroon 0 1 □□□ Orphan Cameroon 0 1 Orphan Cameroon 0 1 Orphan Cameroon 0 1 Orphan Cameroon 2 12 852 Cameroon 1 1 Orphan Cameroon 1 4 Orphan Cameroon 0 2 Orphan Cameroon 0 2 144 T1 0 1 516 T1 1 0 Orphan ND 0 1 Orphan ND 0 1 50 H3 3 78 655 H3 0 1 849 H3 0 1 75 H3 0 7 47 H1 11 1 Orphan H1 1 0 742 H3 1 0 Orphan U 1 0 25 CASE1_DELHI 1 1 839 U 0 4 1338 U 1 0 Orphan U 1 0 Orphan Cameroon 0 1 Orphan Cameroon 0 3 Orphan AFRI_3 0 1 Orphan ND 0 1 370 T1 1 0 438 AFRI_3 1 1 Orphan ND 0 1 331 AFRI_2 0 2 319 AFRI_2 1 1 860 AFRI_2 0 1 Orphan AFRI 0 2 Orphan AFRI_2 1 0 101 AFRI_2 4 3 Orphan AFRI_2 1 0 □ Orphan AFRI_2 1 1 Orphan AFRI_3 1 3 Orphan AFRI_2 0 1 856 AFRI_3 1 0 52 T2 7 16 □ 853 T2 2 17 848 T2 1 1 Orphan T2 3 4 □ Orphan ND 0 1 2088 T2 1 0 Orphan T2 1 0 117 T1 0 7 □ Orphan ND 0 2 Orphan ND 0 2 Orphan T2 1 1 □□□□□□□□□□□□□□□□□□□□□□□□ 125 T2 1 0 403 Cameroon 6 2 844 Cameroon 0 1 Orphan Cameroon 0 1 Orphan Cameroon 0 2 2867 T2 3 0 Orphan ND 0 1 317 T2 4 4 233 T2 2 1 Orphan T2 1 0 49 H3 1 8 □□□ 307 H3 1 0 448 H3 0 1 62 H1 2 0 316 H3 14 4 □□ Orphan H1 1 0 314 H3 0 1 Orphan H1 1 0 Orphan ND 0 1 1204 U 3 1 □□ Orphan ND 0 1 Orphan ND 0 1 □ Orphan ND 0 1 Orphan H1 2 0 330 AFRI 0 1 Orphan AFRI_2 0 1 Orphan AFRI_2 0 1 Orphan AFRI_3 1 0 838 Cameroon 40 18 Orphan Cameroon 1 0 Orphan Cameroon 1 0 Orphan ND 0 1 Orphan Cameroon 0 1 Orphan Cameroon 0 1 Orphan H1 1 0 1037 BOVIS1 1 0 Orphan ND 0 1 308 BOV 1 0 237 U likely H3 0 12 Orphan ND 0 1 46 U (likely H) 13 4 Orphan U 1 0 1656 U 0 2 450 U 6 2 Orphan U 0 1 842 U 0 1 786 U 0 8 569 U 0 1 Orphan U 0 1
ND = not determined.
