|
| CHR | Block | Haplotype | Case, control frequencies | Chi Square | value | Haplotypes | Risk/protective |
|
| 2 | Block 1 | ATAAC | 0.068, 0.577 | 30.524 | 3.30E-08 | rs199826847A; rs189581518T; rs140626972A; rs115282281A; rs150343979C | Protective |
| GCAAT | 0.271, 0.201 | 0.796 | 0.3724 | rs199826847G; rs189581518C; rs140626972A; rs115282281A; rs150343979T | |
| GCCGT | 0.365, 0.031 | 24.483 | 7.50E-07 | rs199826847G; rs189581518C; rs140626972C; rs115282281G; rs150343979T | Risk |
| GCAGT | 0.074, 0.020 | 2.245 | 0.134 | rs199826847G; rs189581518C; rs140626972A; rs115282281G; rs150343979T | |
| ATAAT | 0.045, 0.033 | 0.111 | 0.7396 | rs199826847A; rs189581518T; rs140626972A; rs115282281A; rs150343979T | |
| GCCAT | 0.077, 0.010 | 3.784 | 0.0518 | rs199826847G; rs189581518C; rs140626972C; rs115282281A; rs150343979T | |
| GTCAC | 0.014, 0.044 | 0.785 | 0.3757 | rs199826847G; rs189581518T; rs140626972C; rs115282281A; rs150343979C | |
| GTAGT | 0.043, 0.025 | 0.283 | 0.5945 | rs199826847G; rs189581518T; rs140626972A; rs115282281G; rs150343979T | |
| GTCAT | 0.021, 0.028 | 0.058 | 0.8091 | rs199826847G; rs189581518T; rs140626972C; rs115282281A; rs150343979T | |
| GCCAC | 0.005, 0.015 | 0.254 | 0.6144 | rs199826847G; rs189581518C; rs140626972C; rs115282281A; rs150343979C | |
|
| 3 | Block 1 | AA | 0.139, 0.701 | 37.832 | 7.71E-10 | rs202018563A; rs192044702A | |
| GG | 0.543, 0.130 | 25.633 | 4.13E-07 | rs202018563G; rs192044702G | |
| GA | 0.319, 0.169 | 3.88 | 0.0489 | rs202018563G; rs192044702A | |
|
| 5 | Block 1 | AA | 0.327, 0.817 | 29.093 | 6.90E-08 | rs199715117A; rs147680491A | Protective |
| GC | 0.562, 0.138 | 24.361 | 7.99E-07 | rs199715117G; rs147680491C | Risk |
| AC | 0.100, 0.029 | 2.702 | 0.1002 | rs199715117A; rs147680491C | |
| GA | 0.011, 0.015 | 0.032 | 0.8581 | rs199715117G; rs147680491A | |
|
| 6 | Block 1 | TAAA | 0.161, 0.710 | 29.845 | 4.68E-08 | rs140709825T; rs200026839A; rs57738384A; rs562092150A | Protective |
| GGGA | 0.325, 0.181 | 2.887 | 0.0893 | rs140709825G; rs200026839G; rs57738384G; rs562092150A | |
| GGGC | 0.213, 0.006 | 16.031 | 6.23E-05 | rs140709825G; rs200026839G; rs57738384G; rs562092150C | Risk |
| TGGA | 0.073, 0.044 | 0.429 | 0.5127 | rs140709825T; rs200026839G; rs57738384G; rs562092150A | |
| GAAA | 0.060, 0.019 | 1.365 | 0.2426 | rs140709825G; rs200026839A; rs57738384A; rs562092150A | |
| TGGC | 0.077, 0.000 | 6.078 | 0.0137 | rs140709825T; rs200026839G; rs57738384G; rs562092150C | |
| GGAC | 0.046, 0.014 | 1.091 | 0.2963 | rs140709825G; rs200026839G; rs57738384A; rs562092150C | |
| GGAA | 0.042, 0.013 | 0.915 | 0.3389 | rs140709825G; rs200026839G; rs57738384A; rs562092150A | |
| TGAA | 0.004, 0.014 | 0.224 | 0.6359 | rs140709825T; rs200026839G; rs57738384A; rs562092150A | |
|
| 7 | Block 1 | CAA | 0.136, 0.743 | 36.338 | 1.66E-09 | rs141963459C; rs41273999A; rs34850251A | |
| CGC | 0.711, 0.215 | 25.734 | 3.92E-07 | rs141963459C; rs41273999G; rs34850251C | |
| CGA | 0.078, 0.008 | 4.009 | 0.0453 | rs141963459C; rs41273999G; rs34850251A | |
| CAC | 0.073, 0.007 | 3.811 | 0.0509 | rs141963459C; rs41273999A; rs34850251C | |
| TAA | 0.002, 0.027 | 0.838 | 0.3599 | rs141963459T; rs41273999A; rs34850251A | |
|
| 9 | Block 1 | CA | 0.665, 0.273 | 19.393 | 1.06E-05 | rs142712699C; rs56170708A | Risk |
| AG | 0.065, 0.502 | 25.401 | 4.66E-07 | rs142712699C; rs56170708G | Protection |
| AA | 0.269, 0.224 | 0.338 | 0.5611 | rs142712699A; rs56170708A | |
|
| 12 | Block 1 | TG | 0.626, 0.299 | 13.751 | 2.00E-04 | rs200582033T; rs7302017G | Risk |
| CA | 0.022, 0.442 | 26.444 | 2.71E-07 | rs200582033C; rs7302017A | Protection |
| TA | 0.331, 0.235 | 1.458 | 0.2273 | rs200582033T; rs7302017A | |
| CG | 0.021, 0.024 | 0.017 | 0.8952 | rs200582033C; rs7302017G | |
|
| 14 | Block 1 | TT | 0.379, 0.848 | 29.01 | 7.20E-08 | rs35064097T; rs146398509T | Protection |
| GC | 0.412, 0.061 | 23.087 | 1.55E-06 | rs35064097G; rs146398509C | Risk |
| TC | 0.172, 0.075 | 2.761 | 0.0966 | rs35064097T; rs146398509C | |
| GT | 0.037, 0.016 | 0.553 | 0.4571 | rs35064097G; rs146398509T | |
|
| 15 | Block 1 | GCA | 0.733, 0.189 | 28.894 | 7.65E-08 | rs114516513G; rs11574476C; rs55799438A | Risk |
| ATG | 0.063, 0.473 | 16.566 | 4.70E-05 | rs114516513A; rs11574476T; rs55799438G | Protection |
| GTA | 0.146, 0.113 | 0.224 | 0.6359 | rs114516513G; rs11574476T; rs55799438A | |
| ATA | 0.059, 0.130 | 1.18 | 0.2774 | rs114516513A; rs11574476T; rs55799438A | |
| GTG | 0.000, 0.095 | 3.241 | 0.0718 | rs114516513G; rs11574476T; rs55799438G | |
|
| 16 | Block 1 | CCTT | 0.050, 0.443 | 19.475 | 1.02E-05 | rs7206703C; rs762349227C; rs11552432T; rs16957552T | Protection |
| TGTC | 0.419, 0.236 | 4.451 | 0.0349 | rs7206703T; rs762349227G; rs11552432T; rs16957552C | |
| TGCC | 0.326, 0.057 | 16.473 | 4.93E-05 | rs7206703T; rs762349227G; rs11552432C; rs16957552C | Risk |
| TCTC | 0.076, 0.121 | 0.601 | 0.4382 | rs7206703T; rs762349227C; rs11552432T; rs16957552C | |
| TCCC | 0.127, 0.048 | 2.561 | 0.1096 | rs7206703T; rs762349227C; rs11552432C; rs16957552C | |
| CCCT | 0.000, 0.057 | 2.365 | 0.1241 | rs7206703C; rs762349227C; rs11552432C; rs16957552T | |
| CCTC | 0.002, 0.027 | 0.89 | 0.3456 | rs7206703C; rs762349227C; rs11552432T; rs16957552C | |
|
| 18 | Block 1 | TA | 0.449, 0.889 | 28.425 | 9.74E-08 | rs201319761T; rs138472116A | Protection |
| TG | 0.188, 0.070 | 3.971 | 0.0463 | rs201319761T; rs138472116G | |
| CG | 0.272, 0.008 | 22.621 | 1.97E-06 | rs201319761C; rs138472116G | Risk |
| CA | 0.091, 0.033 | 1.924 | 0.1654 | rs201319761C; rs138472116A | |
|
| 23 | Block 1 | AA | 0.309, 0.791 | 29.009 | 7.21E-08 | rs145970300A; rs146662506A | Protection |
| AG | 0.319, 0.130 | 6.65 | 0.0099 | rs145970300A; rs146662506G | Risk |
| CG | 0.373, 0.079 | 17.124 | 3.50E-05 | rs145970300C; rs146662506G | Risk |
|
