New Strategies for Evaluation and Analysis of SELEX Experiments
Figure 5
The result of the performed motif search using the secondary structure restrictions is shown. In the lower part of the figure, the consensus sequences of the 6 discovered groups, which contain the actual motifs, are depicted. This is done in the form of a directed graph as in Figure 4. The upper part shows one concrete motif in the form of a weblogo, which has been picked from the top consensus group. See Figure 4 for further explanation of the weblogos representation.
