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Computational and Mathematical Methods in Medicine

Volume 2012 (2012), Article ID 329214, 13 pages

http://dx.doi.org/10.1155/2012/329214

## (Radio)Biological Optimization of External-Beam Radiotherapy

Physics Department, Clatterbridge Cancer Centre, Bebington CH63 4JY, UK

Received 19 July 2012; Accepted 31 August 2012

Academic Editor: Eva Bezak

Copyright © 2012 Alan E. Nahum and Julien Uzan. This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.

#### Abstract

“Biological optimization” (BIOP) means planning treatments using (radio)biological criteria and models, that is, tumour control probability and normal-tissue complication probability. Four different levels of BIOP are identified: Level I is “isotoxic” individualization of prescription dose at fixed fraction number. is varied to keep the NTCP of the organ at risk constant. Significant improvements in local control are expected for non-small-cell lung tumours. Level II involves the determination of an individualized isotoxic combination of and fractionation scheme. This approach is appropriate for “parallel” OARs (lung, parotids). Examples are given using our BioSuite software. Hypofractionated SABR for early-stage NSCLC is effectively Level-II BIOP. Level-III BIOP uses radiobiological functions as part of the inverse planning of IMRT, for example, *maximizing TCP whilst not exceeding a given NTCP*. This results in non-uniform target doses. The NTCP model parameters (reflecting tissue “architecture”) drive the optimizer to emphasize different regions of the DVH, for example, penalising high doses for quasi-serial OARs such as rectum. Level-IV BIOP adds functional imaging information, for example, hypoxia or clonogen location, to Level III; examples are given of our prostate “dose painting” protocol, *BioProp*. The limitations of and uncertainties inherent in the radiobiological models are emphasized.

#### 1. Introduction

##### 1.1. Advances in Radiotherapy Technology and Practice from the 1960s to the Present

The practice of external-beam radiation therapy is heavily influenced by the technology available in any one era. In the 1960s linear accelerators began to replace Cobalt machines [1]. Thus higher (bremsstrahlung) photon energies with improved tissue penetration became available. The next major advance was computerized treatment planning systems (TPSs) and shortly thereafter computer tomography (CT) provided 3-D images of the patient anatomy which were imported into the TPS [2]. Through advances in dose computation “algorithms” for megavoltage photon beams, the first planning systems worthy of the adjective “3-D” were developed and began to be available commercially [3]. These early 3-D TPSs made vastly improved targeting of the tumour volume possible but also revealed just how much normal tissue was irradiated using the crude collimation techniques of the time. Beam’s eye view (BEV) computer graphics then led to much improved beam shaping, firstly through custom casting of shielding blocks (which became standard practice in N. America in the 1980s) and subsequently via the computer-controlled multileaf collimator [4]. Already at this stage the improved sparing of normal tissues encouraged efforts at “dose escalation” [5]. However, the really major advance was intensity modulation (IMRT) with its associated “inverse planning” which took normal-tissue sparing or “sculpting” to a whole new level [6–8]. One could now ask the TPS to create a treatment plan which significantly reduced the volume of high dose to even “concave” organs at risk (OAR) situated tightly adjacent to the target volume (in practice the PTV), for example, rectum to the prostate gland. More generally, a vastly increased number of degrees of freedom in the inverse planning process were now available. And the onward march of technology shows no signs of abating. Tomotherapy Hi-Art (Accuray) and more recently RapidArc (VARIAN) and VMAT (Elekta) have provided practical solutions for converting multifield IMRT into continuously rotating intensity modulation, originally known as IMAT [9], making IMRT easier and faster to deliver. In parallel with these advances in beam delivery and treatment planning, on-couch patient imaging was being steadily developed, from the early EPIDS [10] through to kV cone-beam CT [11] which is driving “image guidance” or IGRT. In addition to all this increasing sophistication of megavoltage-*photon* techniques, gantry-based, high-energy, scanned-beam proton therapy is now becoming available in the more affluent parts of the world, principally the USA, Japan, and Europe, thereby achieving even higher degrees of “conformality” and hence greater normal tissue sparing than is possible with any photon-beam technique [12–15].

##### 1.2. How Tumour Dose Is Prescribed

The advances in technology described above have been translated into increases in dose to the tumour, but this has largely been by a “one-size-fits-all” strategy, that is, *escalate the (prescription) dose ** to the same value for every patient *(

*e.g., due to the adoption of IMRT, protons, etc.)*).

__or__change the number of fractions in the__same__way for each patient (e.g., prostate or breast hypofractionation due to low tumourDespite the vastly increased normal-tissue-sparing and tumour-targeting ability at our disposal, the way in which the dose to the tumour is “prescribed” has hardly changed at all. With very few exceptions, strict protocols are followed. These specify for a given tumour type the precise radiation dose that shall be delivered, within tightly defined uniformity limits (e.g., the PTV shall be encompassed by the 95% isodose), in a fixed number of fractions (delivered daily between Monday and Friday). This rigid predetermination of the very quantities, the total and fractional doses to the tumour, and , that determine the probability of local control, removes the single most important weapon for improving treatment outcome—increasing the tumour dose and/or fraction size.

The above dose-escalation strategy has resulted in some modest gains in local control rates, particularly for intermediate- and late-stage prostate tumours [16] for no increase or even decreases in (principally rectal) complication rates. But as will be demonstrated in what follows, a rigid predefined dose prescription will lead to underdosage in some patients and to adverse effects from overdosage in others [17]. With reference to the different levels of biological optimization described in what follows, we label the above approach “level-zero optimization.”

#### 2. Materials and Methods

##### 2.1. Radiobiological Models for TCP and NTCP

Models for estimating the probability of tumour (local) control (TCP) and of normal-tissue complication (NTCP) were first proposed in the second half of the 1980s and the first half of the 1990s (see [18] for a useful summary of the various models and associated references). In the intervening period of 20 years or so the active use of these models has largely been confined to *evaluating* treatment plans, despite a very considerable literature on the analysis of clinical outcome data for determining “best fit” parameter values, recently summarized by the QUANTEC project on normal tissue complications [19]. By definition these best-fit parameters make the models reproduce the clinical data points they were fitted to, but the associated confidence intervals are usually fairly wide. The source of this sometimes large uncertainty may reside in the functional form of the model but also in the nature of the data and the way they are reported. However, it should be borne in mind that uncertainty is intrinsic to radiotherapy treatments; for example, meeting normal tissue dose criteria is not a guarantee against the occurrence of a complication. To some extent, biological models are also subject to this uncertainty. All the radiobiological evaluations given in this paper should be understood as estimates based on the best-fit parameters available today.

It is emphasized that the current TCP, NTCP models are hybrid in nature; they apply to the *individual* patient’s dose distribution, expressed in terms of dose-volume histograms (DVHs), but to the *population*-averaged patient biology. Because in general we do not know the radiosensitivity of the tumour clonogens of the patient in question [20], the “Marsden” TCP model [21, 22] uses a mean and an assumed standard deviation over the population; how these parameters are obtained for a given tumour type is briefly described in the next section. The currently used NTCP models also involve population-averaged biology though this is generally implicit rather than explicit in their mathematical form.

Certain radiobiological models are wholly or partly mechanistic (e.g., Marsden TCP, Relative Seriality [18]) while others are purely phenomenological (Lyman [23] and Kutcher et al. [24]). In all cases, some assumptions are explicitly or implicitly made so as to render the problem of predicting the outcome of radiotherapy mathematically manageable. For example, the LKB model considers all volume elements of a particular organ to have the same importance for the function of this organ. Furthermore the 3-D dose distribution in the organ/tissue is represented by a dose-volume histogram, which is inherently 2-D and does not include any spatial information. The Marsden TCP model assumes firstly that a tumour is only “controlled” (i.e., eliminated) when every single clonogen has been “killed” (i.e., rendered incapable of further division), and further, at least as applied in the examples given here, that all the clonogens have the same radiosensitivity and that this remains constant from fraction to fraction. It is important to keep in mind these assumptions.

In the present paper our focus is firmly on using NTCP and TCP models to change or *optimize *the way that (external-beam) treatment planning is done. The *power* of this approach is illustrated by Figure 1. However, in cases where metrics such as EUD for tumours [25, 26], gEUD for normal tissues [27], and mean lung dose (MLD) [28] are closely correlated with either TCP or NTCP then optimization based on these surrogate quantities can also be classed as *radiobiological optimization. *

##### 2.2. The Different “Levels” of Radiobiological Optimization

Radiobiological models can be used to optimize treatment plans in a variety of ways. We have found it convenient to define five different “levels,” in approximate order of increasing sophistication:

*Level I*

Individualisation of on an *isotoxic *(i.e., iso-NTCP) basis.

*Level II*

Individualisation of not only but also the *number of fractions *on an *isotoxic* basis.

*Level III*

The use of radiobiological functions (EUD and/or NTCP and TCP) in the *inverse planning *algorithm.

*Level IV*

Additionally, patient-specific information from functional imaging is added to radiobiological inverse planning dose-painting.

*Level V*

Individual patient biology, for example from genomics, is added to any of the above.

Levels I to IV will be discussed in turn and illustrated by examples generated using software created at our centre.

#### 3. Results and Discussion

##### 3.1. Isotoxic Prescription Dose Customization: Level I

Shortly after the appearance of the first NTCP models [23, 24, 29] it was suggested that these models could be used to choose an optimum dose to the tumour [30, 31]; this was followed by more detailed studies such as [32]. However, it is only relatively recently that “isotoxic” clinical protocols have been put into practice [33].

The basic idea is illustrated in Figures 2 and 3. The standard Clatterbridge protocol for the radical radiotherapeutic treatment of non-small-cell lung tumours was, until around 2009, to treat to a total dose of 55 Gy in 20 fractions over 4 weeks [34]. A relatively straightforward 3-beam 6 MV technique was employed. Figure 2 shows the NTCP values (grade 2 radiation pneumonitis) for a series of 24 patients treated around 2005-6; the NTCPs were computed from the DVHs of the paired lung minus the GTV using the Lyman-Kutcher-Burman (LKB) NTCP model [23, 24] with parameters from [35]; naturally correction was made for the varying fraction sizes in the DVHs, using [18]. The wide spread in these values is immediately evident, from as low as *≈*2% to as high as *≈*22%, corresponding to the large differences in normal lung coverage by the beams, caused by patient-to-patient differences in tumour size and location. In no sense could it be said that all these patients were “treated to tolerance.” Local control rates were estimated to be in the region of 35% [36].

For the same cohort, the prescription doses were recomputed so that the NTCP for each case was 10%. For a small number of the treatment plans, was reduced below its “isotoxic” value due to the oesophageal constraint (set at = 63 Gy for 20 fractions). An additional constraint we imposed was not to allow the TCP to exceed 99.0%; this restricted the highest value of to around 85 Gy. In all cases the number of fractions remained at 20. The “spectrum” of prescription doses is shown in Figure 3(a). In only two cases did this remain at *≈*55 Gy. Figure 3(b) shows the TCP values “before” (pale blue) and “after” (maroon) dose customization, estimated using the “Marsden” TCP model [21, 22] with parameters from [37] (see below). The spread in TCP at the constant of 55 Gy is due to the variation in GTVs, which is translated into initial clonogen number via the clonogen density . The TCPs for the “isotoxic” prescription doses range from *≈*5% to *≈*100% (to be precise, 99%). The really important number is the average TCP which has increased from *≈*44% to *≈*60%. This has been achieved for absolutely no increase in the average NTCP, which is *≈*10% in both cases. In clinical practice the resulting increase in the average local control rate may be even greater, as the *reduction* in for a number of patients in this modelling exercise would probably not be applied clinically.

The parameters used in the TCP estimation were clons cm^{−3}; , , Gy; days; days. These were derived by fitting the predictions of the TCP model to published clinical outcomes [37] for a wide range of fraction sizes, total doses, and overall treatment times [36, 39, 40]; the fit was excellent.

##### 3.2. Treatment Protocols Based on Level-I Optimization

In the UK two current phase I/II trials for radical radiotherapy of NSC lung tumours have been developed based on “isotoxic” dose individualization. The IDEAL-CRT trial [34, 43] involves 30 daily fractions over 6 weeks, with the prescription dose adjusted until NTD_{mean} (mean normalized total dose) for the non-involved lung is equal to 18.2 Gy; this corresponds to a 20% rate of grade 2, or greater, pneumonitis. is then reduced by 10% to compensate for the possible effect of the concurrent chemotherapy. additionally, is restricted to a window of 63–73 Gy.

The I-START (ISoToxic Accelerated RadioTherapy) protocol [44] is a 20-fraction, 4-week treatment, radiation alone, and stages II to IIIb NSCLC patients are eligible. is chosen such that Gy and is restricted to the range 58–65 Gy, unless further limited due to cardiac, spinal cord or oesophageal constraints. This can be compared to the standard Clattebridge protocol of 55 Gy in 20 fractions for this patient group. It should be noted that both protocols are for fixed numbers of fractions; consequently increasing means that the dose per fraction is also increased.

Van Baardwijk et al. [33] described an individualized dose prescription study of 166 Stage-III NSCLC patients. Patients were treated to the maximally tolerable dose (MTD) by *increasing the number of fractions* (of 1.8 Gy twice daily) until normal-tissue constraints for the noninvolved lung and spinal cord were met. They reported favourable 1- and 2-year overall survival with acceptable toxicity.

One of the clear advantages of this type of optimization is that improvements in the degree of conformality of treatment plans for any given tumour type, due, for example, to moving from 3-D conformal to intensity modulation, from fixed, few-field IMRT to rotational IMRT (Tomotherapy, RapidArc, VMAT, etc.), or even from megavoltage photons to protons, are automatically translated into increases in the target dose, and therefore into probable improvements in clinical outcome.

##### 3.3. Level-II Optimization: Customization of the Prescription Dose and Fraction Number under “Isotoxicity”

Fractionation is possibly the most “radiobiological” of all the variables in external-beam radiotherapy [45, 46]. The classic textbook recipe is that as small a fraction size as is practicable should be used to maximize the “therapeutic ratio” (see Figure 1), which follows logically if *α*/*β* is low for late-reacting normal tissues and high for tumour clonogens [46–48]. However, two issues complicate this oversimplified picture. Firstly, increasing the number of fractions may well take the overall treatment time beyond 3 weeks, and therefore, in the case of lung and head and neck tumours, into the clonogen proliferation time zone [40], leading to a loss of local control for a given tumour BED [49]. Secondly, the LQ-based “Withers” formula for computing *normal-tissue* isoeffect as a function of *α*/*β*, dose per fraction and total dose [41, 50] is frequently used in an illogical manner. If instead of setting the dose in the Withers’ expression equal to the (tumour) prescription dose—that is, the “textbook” procedure—it is chosen to be representative of the “behaviour” of the normal tissue to which it is intended to apply (e.g., close to the mean organ dose for the case of “parallel” lung), then it can be shown that much larger fraction sizes can be safely used, especially for highly conformal treatment plans [42, 51]. Figure 4 illustrates this for the case of a lung tumour surrounded by “parallel” lung tissue; similar curves can be found in Vogelius et al. [52].

The BioSuite software [53] enables the impact of changing the number of fractions over a wide range to be explored. Figures 5 and 6 have been generated using BioSuite’s “isotoxic optimization” option, with the choice of 10% NTCP for radiation pneumonitis (RP), for two contrasting treatment plans for NSC lung tumour radiotherapy. For the case of Figure 5, for the (standard) prescription of 55 Gy in 20 fractions, the TCP was 48.0% and the NTCP (RP) 6.6%. When the (total) dose is increased to make NTCP(RP) = 10%, we see how the TCP goes through a maximum at around 15 fractions and then decreases, due to clonogen proliferation ( days, days assumed). The optimum number of fractions is thus 15, that is, a 3-week treatment. This figure represents the “classical radiobiology” behaviour of the therapeutic ratio for a proliferating tumour (e.g., [49, 54]).

The treatment plan analysed in Figure 6 is also for a NSC lung tumour, but here the tumour is much smaller and more favourably located. The coverage of the non-involved lung is much less and this results in a very different dependence of TCP on the fraction number. This is a clear case of the effective dose in the normal lung being very much lower than the tumour dose, thus completely invalidating the conventional use of Withers’ isoeffect formula (see the discussion at the beginning of this section).

The examples in the above two figures illustrate very clearly how different one patient can be from another in terms of the dependence of TCP on the number of fractions under lung isotoxicity. This strongly suggests that when the principal organ at risk behaves in a “parallel” fashion (as does the lung [55]), and there is evidence for tumour clonogen proliferation [40], biologically optimized radiotherapy will result in customizing the fractionation scheme based on the patient’s treatment plan. The extreme hypofractionation employed in so-called stereoablative radiotherapy (SABR, formerly known as SBRT) for early stage NSC lung tumours [56] is effectively an example of this, though the dose is not generally individualized. However, for many of the reported series of SABR treatments local control rates are so high for acceptably low complication rates that it could be argued that there is no need for isotoxic dose customization [57, 58].

Hoffmann et al. [17] conducted an *in silico *trial, not dissimilar to the one described in the previous section (Figures 2 and 3). They individualized the dose prescription taking into account dose constraints not only for lung but also for spinal cord, oesophagus, brachial plexus, and heart. The number of fractions was set at 15, 20, and 33. They found that dose escalation was possible in 79% of the cases. They emphasised that to take the tumour dose to even higher levels it was essential to employ techniques which maximally spare the oesophagus.

##### 3.4. Level-III BIOP: Radiobiologically Guided Inverse Planning

No modification of the treatment plan, that is, of the relative dose distributions, is involved in Level I or Level II optimization. Level III moves beyond this and, in the context of intensity modulation, exploits the mathematical properties of the TCP and NTCP functions in creating the “inverse” plan. This approach has one obvious advantage over dose-volume-based approaches to inverse planning: the number of degrees of freedom available to the optimizer is significantly increased. The intensity of each beamlet comprising the plan becomes a variable which can be adjusted to produce the best possible plan, from a radiobiological point of view. Thus the optimizer is now free to find solutions such as a reduction in the target dose adjacent to a critical normal tissue coupled with a boost to other parts of the target volume [59]. Obviously the target volume dose will no longer be uniform, but the TCP function will automatically take care of the effect of “hot” and “cold” spots.

There are however a couple of hurdles to overcome before this method can be applied. Firstly, all TPS inverse optimization engines work by minimizing a global cost function which is a measure of how well a plan meets clinical requirements (e.g., [8, 60]). For dose-based planning, these requirements are formulated in terms of dose/volume limits (e.g., maximum dose of 50 Gy in OAR1, minimum dose of 64 Gy in target volume 2, etc.). In the case of radiobiological planning, however, the objective function to be minimized should contain TCP- and NTCP-based criteria, possibly in addition to dose/volume-based ones. One possibility is to define the objective function so that the optimizer will try to maximize TCP while keeping NTCP equal to or below some user-defined threshold. Another possibility is to let the optimizer find the dose distribution yielding the highest “uncomplicated tumour local control probability” also called [61, 62]. The mathematical form of the objective function has a critical influence on the resulting dose distribution.

Secondly, inverse planning engines rely on some form of *gradient descent* algorithm to minimize the objective function (e.g., [60]). These algorithms can be trapped in local minima [8], corresponding to suboptimal plans, when the objective function possesses specific mathematical properties such as nonconvexity. While the functions for TCP and NTCP in the most widely used models are intrinsically nonconvex, mathematical transformations can help to make these functions amenable to gradient descent minimization (with limitations, see reference [63]). In practice, very few commercial TPS include this kind of optimization. When they do, radiobiological models are simplified to improve the reliability of the inverse optimization process [64] at the expense of the radiobiological therapeutic ratio.

We give below an example of radiobiological optimization, for the case of a non-small cell lung tumour. This was created by ourselves by coding an objective function involving the Marsden TCP and LKB NTCP models inside the Pinnacle Research Interface (PHILIPS Oncology Systems) [65]. The parameters used were the same as in the “Level-II” example described earlier. The resulting (cumulative) DVHs are shown in Figure 7.

In searching for the highest TCP for a fixed NTCP the optimiser creates beams with a higher intensity in the centre (not shown explicitly here) resulting in nonuniform distributions in the PTV and the GTV; the corresponding DVHs are labelled as “Bio-Plan (isotoxic)” in the figure. There is a significant TCP increase while the DVHs for the “paired” lung minus the GTV (“uninvolved” lung) for the standard and radiobiologically optimized plans are virtually identical, thus demonstrating that the optimizer was able to keep the NTCP virtually constant. The much lower TCP calculated for the PTV, which is a somewhat artificial result, is a result of two factors: firstly and obviously the PTV volume is considerably larger than that for the GTV thus automatically reducing the TCP, but secondly the dose inhomogeneity in the PTV is very much greater. This serves to emphasize that if this strategy is to be implemented clinically then it will be very important to minimize tumour motion, due principally to respiration. Witte et al. [66] describe a sophisticated implementation of level-III BIOP involving not only TCP and NTCP but also the effect of random and systematic errors; their software platform was also the Pinnacle Research Interface.

Engelsman et al. [67] showed that departing from a uniform dose to lung tumours could result in an increase in the therapeutic ratio. Their approach was much less sophisticated than radiobiological inverse planning; they explored the effect of reducing the field sizes, and thus PTV-CTV margin, thereby causing the dose in the tumour to be inhomogeneous. Simultaneously they increased the beam monitor units for all the beams in order to keep the NTCP constant. The tumour EUD, which is closely correlated with the TCP, went through a maximum at a margin size far below the one generally recommended. Similar results were obtained by Baker et al. [68] and by Popescu et al. [69]. In the latter case 4DCT images, reconstructed over the respiration cycle, were used as input to the Pinnacle research TPS, which accumulated the doses in each voxel as the images were deformed by respiration. It was found that the margin width yielding the *highest* TCP for *constant* NTCP for the uninvolved lung (all the doses were rescaled for each case) was around 5 mm, compared to the standard clinical choice of 15 mm. The above three approaches could be classed as “forward-planned radiobiological optimization,” though they belong to “Level III” as they involve modifications to the treatment plan in order to increase the TCP.

A fixed number of fractions has been assumed in these examples of level-III radiobiological optimization. This need not be the case, though it is difficult to see how the number of fractions, , can be added as an independent variable in the inverse planning procedure, as the values of TCP and NTCP for a given dose depend on . This means that the inverse optimization would need to be performed several times, varying each time. One possible strategy to reduce the number of iterations could be to choose a standard number of fractions, say 20, perform the radiobiological optimization, and export the DVHs to *BioSuite*. Then a TCP versus curve (similar to those of Figures 5 and 6) could suggest an optimum value of which could be fed back to the TPS and the inverse radiobiological optimizer then re-run with this modified numbers of fractions.

##### 3.5. Level IV BIOP—Adding Patient-Specific Information from Functional Imaging

Currently a great deal of attention is being devoted to how information on individual tumour “biology” revealed by function imaging can be used for modifying the dose to the specific regions of the target (e.g., [69–73]). If the particular tumour property being imaged is related to clonogen density then it makes obvious sense to boost the dose to the identified subvolumes. Similarly if the images can be translated into the degree of hypoxia then the radiosensitivity in the TCP model can be suitably modified. The descriptive term “dose painting” has entered the radiotherapy lexicon to describe the various approaches being tried.

We describe below our own work with intermediate- and high-risk prostate tumours. The dominant interprostatic lesions (DILs) are identified using a combination of diffusion-weighted MR, choline PET and template biopsies. Our BIOPROP protocol makes use of our PRI-based radiobiological inverse planning (see previous section on Level III BIOP). The objective function attempts to maximise the TCP in the DILs (see Figure 8) while keeping the NTCP for the rectum below 7%, for each of two distinct endpoints, bleeding and faecal incontinence. Additionally there are physical dose constraints of 74 Gy minimum dose outside the DILs but inside the PTV and a maximum urethral dose of 74 Gy. To date we have delivered a small number of pilot treatments in 37 fractions.

The Pinnacle Research Interface (PRI) cannot be used clinically. Prostate tumours are currently treated at Clatterbridge using *RapidArc* (VARIAN) which is a form of rotational IMRT [9] planned on the Eclipse (VARIAN) TPS [74]. Consequently we wanted to deliver our inverse radiobiologically optimised dose painting plans using* RapidArc*. Our solution was to transfer the PRI-derived DVHs to the Eclipse TPS and use these to drive the *RapidArc* optimizer. An example of the resulting DVHs is shown in Figure 8.

It can be noted that the DIL DVH for the RapidArc plan corresponds to a more homogeneous dose (between 80 and 83 Gy) than that for the Pinnacle plan, which was created using 11 fixed IM fields. This is because it was not possible to ask the RapidArc optimizer to “maximize the TCP”. However, the effect is only to reduce the TCP by 1.5%. Our analysis of the first 5 BioProp treatments indicates an average % corresponding to maximum doses in the DILs from 82.4 to 87.4 Gy, compared to -71% for the standard 74 Gy treatment (parameters assumed in the TCP model: , , , ; these were obtained from a fit to the clinical outcomes reported by Dearnaley et al. [75]).

##### 3.6. Level V BIOP—Adding Individual Patient Biology to any of the above Levels

As far as we are aware there are no specific examples in the literature of either *in silico *or clinical studies of this further refinement of radiobiological optimization strategies. As discussed earlier, the currently used TCP and NTCP models are hybrids in the sense that whilst they make predictions for a specific treatment plan (to be precise for the DVHs computed from the plan) they effectively do so for a population of patients with that specific treatment plan. Thus what % means is that 65 out of 100 patients will have a tumour of that size controlled by the dose distribution in question. If, however, we knew the radiosensitivity of the tumour clonogens for the patient undergoing treatment [20], then this prediction would be overwhelmingly converted into either one or zero that is, controlled/not controlled, with the TCP increasingly rapidly from zero to unity over a very narrow range of doses [18, 21, 22]. This information would then enable us to choose the lowest prescription dose still achieving say TCP > 99%. Equally well, a prediction of a complication rate of say 6.0% means that for that specific dose distribution in the normal tissue in question, 6 out of 100 patients will experience the complication. Were we to possess information on the individual biology of the patient this prediction would in principle be narrowed down to either a very low (possibly zero) probability or a very high one. These issues have been explored by, amongst others, Lambin et al. [76] and Rutkowska [77].

Tucker et al. [78] showed that single nucleotide polymorphisms (SNPs) can significantly improve the ability of the Lyman MLD model to predict the incidence of radiation pneumonitis. In a study on clinical risk factors the same group showed that the generalized Lyman model with patient smoking status taken into account produced NTCP estimates up to 27 percentage points different from the model based on dose-volume factors alone [79]. Valdagni et al. [80] attempted to understand why, despite “excellent” rectal dose-volume histograms (DVHs), certain patients treated for prostate cancer exhibited late rectal bleeding (LRB) whereas others with “poor” DVHs did not. Thirty-five genes involved in DNA repair/radiation response were analyzed. It was found that nine genes were significantly down-regulated in the low-risk bleeder group versus the high-risk bleeder and high-risk non-bleeder groups; four genes were significantly upregulated in the high-risk non-bleeder group compared to the other groups. It is to be hoped that studies such as these will result in the NTCP models capable of making different predictions for “biologically different” patients having very similar DVHs, and ultimately in the incorporation of such improved models into the various levels of radiobiological optimization discussed here [81, 82].

#### 4. Summary and Conclusions

The recent AAPM task group report on the use and QA of biologically related models for treatment planning [83] stated in the Introduction:

Until recently, the quality of a RT plan has been judged by physical quantities, that is, dose and dose-volume (DV) parameters, thought to correlate with biological response rather than by estimates of the biological outcome itself. It is widely recognized that the DV criteria, which are merely surrogate measures of biological responses, should be replaced by biological indices in order for the treatment process to more closely reflect clinical goals of RT. Developments in our understanding of advantages and limitations of existing dose-response models begin to allow the incorporation of biological concepts into a routine treatment planning process.

This paper has proposed several ways (or levels) in which the “biological indices” TCP and NTCP can be incorporated directly into the treatment planning process, not merely in order to evaluate and compare rival plans (e.g., Iori et al. [84]), but to *optimize* treatment plans in terms of the prescription dose and number of fractions, thereby improving clinical outcomes. As a result of much careful research, summarized in the QUANTEC (QUantitative Analysis of Normal Tissue Effects in the Clinic) series of papers [85], the predictions of especially the widely applied and researched Lyman-Kutcher-Burman NTCP model [23, 24] are now sufficiently reliable for certain important organs/tissues and endpoints (rectal bleeding [86], pneumonitis [55], radiation-induced liver disease, xerostomia in the parotid glands, possibly also cardiac complications [87]) that treatment protocols involving “isotoxic” tumour dose individualization can be developed and applied [17, 33, 34, 44]. Software such as *BioSuite *[53] makes this straightforward as long as only prescription dose *rescaling* and/or fraction number customization is involved. In order to plan and deliver radiobiologically based IMRT, however, treatment planning systems must incorporate TCP and NTCP into the objective functions; at the time of writing full-blown radiobiological inverse planning is possible in at most two of the commercial systems [64, 83], though planning based on gEUD [27] is more widely available.

By taking full advantage of the steadily improving degree of conformality achievable with modern techniques, the individualization of fractionation (towards fewer fractions) has huge radiobiological potential. Furthermore, hypofractionation also delivers increased patient convenience and a reduction in cost per treatment course, which could be especially important for proton therapy [13]. Two notes of caution are in order however. Firstly the methods and models employed to generate much of the data in this paper (e.g., Figures 4, 5 and 6) are either directly, in the case of the Marsden TCP model [18, 21, 22, 31], or indirectly, in the case of Lyman-Kutcher-Burman NTCP model [18, 23, 24], based on the linear-quadratic expression linking (cell) surviving fraction and absorbed dose [41, 45–50, 88]. At doses per fraction above *≈*10 Gy, however, the so-called *generalized* linear quadratic model proposed by Wang et al. [89] and by Carlone et al. [90] may be more correct, though this is by no means universally accepted [91]. Whatever the “truth” eventually turns out to be, if the LQ model does overpredict cell killing at very large fraction sizes then at such doses per fraction LQ-based radiobiological models will result in an *over*prediction of NTCP but an *under*prediction of TCP. Consequently the resulting hypofractionation schemes are highly unlikely to cause excessive complication rates [58]. Secondly, regarding proton-beam radiotherapy there is an added complication that is (thankfully!) not present when considering low-LET modalities (which include the bremsstrahlung photon beams produced in linear accelerators): the biological effect of a given number of Grays of absorbed dose is not the same everywhere in the patient (or in a phantom); it depends on the proton energy spectrum [92–94]. Though this dependence of proton RBE on energy and hence on depth, and therefore position in the patient, probably never exceeds *≈*10%, Dale et al. [93] have pointed out that a 10% uncertainty in RBE is precisely equivalent to a 10% uncertainty in dose in photon treatment plans, which would not be tolerated. Therefore more research is required on proton RBE variation [92, 93].

In conclusion, if today’s sophisticated imaging, treatment planning and radiation-delivery techniques, and tomorrow’s genome-based patient biology are to be translated into maximum clinical benefit then the stipulation of a fixed dose to the target volume in today’s treatment protocols must be replaced by *individualized doses*, and, in certain situations, *individualized fractionation*. In the right hands biomathematical models of radiation effect are powerful tools [95, 96]; to paraphrase Chapman and Gillespie [97], let’s use them!

#### Acknowledgments

Among the many colleagues who have contributed significantly to the ideas and the work described in this paper the authors would especially like to mention Beatriz Sanchez-Nieto, Giovanna Gagliardi, Mauro Iori, Aswin Hoffmann, Zafar Malik, Chinnamani Eswar, Jason Lester, Isabel Syndikus, Diana Tait, Colin Baker, John Fenwick, Eva Rutkowska, Vanessa Panettieri, Philip Mayles, Don Chapman, Gordon Steel, Roger Dale, Charlie Deehan, Jack Fowler, Marco Carlone, Pavel Stavrev, Marnix Witte, Joe Deasy, Ruggero Ruggieri, Marco Schwarz, Claudio Fiorino, Stefano Gianolini, and Riccardo Valdagni. They also wish to thank Kjell Eriksson of RaySearch AB for the use of ORBIT and Philips Oncology Systems for the use of the Pinnacle Research Interface.

#### References

- L. Loverock, “Linear accelerators, ch. 36,” in
*Handbook of Radiotherapy Physics. Theory and Practice*, P. Mayles, A. Nahum, and J. C. Rosenwald, Eds., pp. 197–239, Taylor & Francis, London, UK, 2007. - A. Neal, “Patient data acquisition, ch. 30,” in
*Handbook of Radiotherapy Physics. Theory and Practice*, P. Mayles, A. Nahum, and J. C. Rosenwald, Eds., pp. 647–655, Taylor & Francis, London, UK, 2007. - M. Bidmead and J. C. Rosenwald, “Dose evaluation of treatment plans, ch. 35,” in
*Handbook of Radiotherapy Physics. Theory and Practice*, P. Mayles, A. Nahum, and J. C. Rosenwald, Eds., pp. 719–729, Taylor & Francis, London, UK, 2007. - P. Mayle and P. Williams, “Megavoltage photon beams, ch. 22,” in
*Handbook of Radiotherapy Physics. Theory and Practice*, P. Mayles, A. Nahum, and J. C. Rosenwald, Eds., pp. 451–481, Taylor & Francis, London, UK, 2007. - D. M. Tait, A. E. Nahum, L. C. Meyer et al., “Acute toxicity in pelvic radiotherapy; a randomised trial of conformal versus conventional treatment,”
*Radiotherapy and Oncology*, vol. 42, no. 2, pp. 121–136, 1997. View at Publisher · View at Google Scholar · View at Scopus - I. Lax and A. Brahme, “Rotation therapy using a novel high-gradient filter,”
*Radiology*, vol. 145, no. 2, pp. 473–478, 1982. View at Scopus - A. Brahme, J. E. Roos, and I. Lax, “Solution of an integral equation encountered in rotation therapy,”
*Physics in Medicine and Biology*, vol. 27, no. 10, pp. 1221–1229, 1982. View at Scopus - “Conformal and intensity-modulated radiotherapy,” in
*Handbook of Radiotherapy. Physics Theory and Practice*, S. Webb, Ed.P. Mayles, A. Nahum, and J. C. Rosenwald, Eds., pp. 943–985, Taylor & Francis, London, UK, 2007. - M. Iori, M. Paiusco, E. Cagni et al., “The intensity modulated multiple arc (imma) technique: forward & inverse planned procedures to deliver hypofractionated imat treatments,”
*Current Radiopharmaceuticals*, vol. 2, no. 3, pp. 149–159, 2009. View at Publisher · View at Google Scholar · View at Scopus - C. Mubata, “Portal imaging devices, ch. 14,” in
*Handbook Of Radiotherapy Physics. Theory And Practice*, P. Mayles, A. Nahum, and J. C. Rosenwald, Eds., pp. 261–269, Taylor & Francis, London, UK, 2007. - D. A. Jaffray, J. H. Siewerdsen, J. W. Wong, and A. A. Martinez, “Flat-panel cone-beam computed tomography for image-guided radiation therapy,”
*International Journal of Radiation, Oncology, Biology, Physics*, vol. 53, no. 5, pp. 1337–1349, 2002. View at Publisher · View at Google Scholar · View at Scopus - A. J. Lomax, T. Böhringer, A. Bolsi et al., “Treatment planning and verification of proton therapy using spot scanning: initial experiences,”
*Medical Physics*, vol. 31, no. 11, pp. 3150–3157, 2004. View at Publisher · View at Google Scholar · View at Scopus - H. Nyström, “The role of protons in modern and biologically-guided radiotherapy,”
*Acta Oncologica*, vol. 49, no. 7, pp. 1124–1131, 2010. View at Publisher · View at Google Scholar · View at Scopus - J. M. Schippers and A. J. Lomax, “Emerging technologies in proton therapy,”
*Acta Oncologica*, vol. 50, no. 6, pp. 838–850, 2011. View at Publisher · View at Google Scholar · View at Scopus - E. Roelofs, M. Engelsman, and C. Rasch, “Results of a multicentric in silico clinical trial (ROCOCO): comparing radiotherapy with photons and protons for non-small cell lung cancer,”
*Journal of Thoracic Oncology*, vol. 7, pp. 165–176, 2012. - G. A. Viani, E. J. Stefano, and S. L. Afonso, “Higher-than-conventional radiation doses in localized prostate cancer treatment: a meta-analysis of randomized, controlled trials,”
*International Journal of Radiation, Oncology, Biology, Physics*, vol. 74, no. 5, pp. 1405–1418, 2009. View at Publisher · View at Google Scholar · View at Scopus - A. L. Hoffmann, E. G. C. Troost, H. Huizenka, J. H. A. M. Kaanders, and J. Bussink, “Individualized dose prescription for hypofractionation in advanced non-small-cell lung cancer radiotherapy: an
*in silico*trial,”*International Journal of Radiation Oncology, Biology, Physics*, vol. 83, pp. 1596–1602, 2012. - A. Nahum and G. Kutcher, “Biological evaluation of treatment plans, ch. 36,” in
*Handbook of Radiotherapy Physics Theory and Practice*, P. Mayles, A. Nahum, and J. C. Rosenwald, Eds., pp. 731–771, Taylor & Francis, London, UK, 2007. - A. Jackson, L. B. Marks, S. M. Bentzen et al., “The Lessons of QUANTEC: recommendations for reporting and gathering data on dose-volume dependencies of treatment outcome,”
*International Journal of Radiation Oncology, Biology, Physics*, vol. 76, no. 3, pp. S155–S160, 2010. View at Publisher · View at Google Scholar · View at Scopus - C. M. L. West, “Intrinsic radiosensitivity as a predictor of patient response to radiotherapy,”
*British Journal of Radiology*, vol. 68, no. 812, pp. 827–837, 1995. View at Scopus - S. Webb and A. E. Nahum, “A model for calculating tumour control probability in radiotherapy including the effects of inhomogeneous distributions of dose and clonogenic cell density,”
*Physics in Medicine and Biology*, vol. 38, no. 6, pp. 653–666, 1993. View at Publisher · View at Google Scholar · View at Scopus - A. E. Nahum and B. Sanchez-Nieto, “Tumour control probability modelling: basic principles and applications in treatment planning,”
*Physica Medica*, vol. 17, no. 2, pp. 13–23, 2001. View at Scopus - J. T. Lyman, “Complication probability as assessed from dose-volume histograms,”
*Radiation Research*, vol. 104, no. 2, pp. S13–S19, 1985. View at Scopus - G. J. Kutcher, C. Burman, L. Brewster, M. Goitein, and R. Mohan, “Histogram reduction method for calculating complication probabilities for three-dimensional treatment planning evaluations,”
*International Journal of Radiation Oncology, Biology, Physics*, vol. 21, no. 1, pp. 137–146, 1991. View at Scopus - A. Niemierko, “Reporting and analyzing dose distributions: a concept of equivalent uniform dose,”
*Medical Physics*, vol. 24, no. 1, pp. 103–110, 1997. View at Publisher · View at Google Scholar · View at Scopus - M. A. Ebert, “Viability of the EUD and TCP concepts as reliable dose indicators,”
*Physics in Medicine and Biology*, vol. 45, no. 2, pp. 441–457, 2000. View at Publisher · View at Google Scholar · View at Scopus - A. Niemierko, “A generalized concept of equivalent uniform dose (EUD),”
*Medical Physics*, vol. 26, p. 1101, 1999. - S. L. S. Kwa, J. V. Lebesque, J. C. M. Theuws et al., “Radiation pneumonitis as a function of mean lung dose: an analysis of pooled data of 540 patients,”
*International Journal of Radiation Oncology, Biology, Physics*, vol. 42, no. 1, pp. 1–9, 1998. View at Scopus - P. Källman, A. Agren, and A. Brahme, “Tumour and normal tissue responses to fractionated non-uniform dose delivery,”
*International Journal of Radiation Biology*, vol. 62, no. 2, pp. 249–262, 1992. View at Scopus - T. S. Lawrence, R. J. Tesser, and R. K. Ten Haken, “An application of dose volume histograms to the treatment of intrahepatic malignancies with radiation therapy,”
*International Journal of Radiation Oncology, Biology, Physics*, vol. 19, no. 4, pp. 1041–1047, 1990. View at Scopus - A. E. Nahum and D. M. Tait, “Maximising local control by customised dose prescription for pelvic tumours,” in
*Advanced Radiation Therapy: Tumour Response Monitoring and Treatment Planning*, A. Breit, Ed., pp. 425–431, Springer, Heidelberg, Germany, 1992. - B. Sanchez-Nieto, A. E. Nahum, and D. P. Dearnaley, “Individualization of dose prescription based on normal-tissue dose-volume and radiosensitivity data,”
*International Journal of Radiation Oncology, Biology, Physics*, vol. 49, no. 2, pp. 487–499, 2001. View at Publisher · View at Google Scholar · View at Scopus - A. Van Baardwijk, S. Wanders, L. Boersma et al., “Mature results of an individualized radiation dose prescription study based on normal tissue constraints in stages I to III non-small-cell lung cancer,”
*Journal of Clinical Oncology*, vol. 28, no. 8, pp. 1380–1386, 2010. View at Publisher · View at Google Scholar · View at Scopus - J. D. Fenwick, A. E. Nahum, Z. I. Malik et al., “Escalation and intensification of radiotherapy for stage III non-small cell lung cancer: opportunities for treatment improvement,”
*Clinical Oncology*, vol. 21, no. 4, pp. 343–360, 2009. View at Publisher · View at Google Scholar · View at Scopus - K. De Jaeger, M. S. Hoogeman, M. Engelsman et al., “Incorporating an improved dose-calculation algorithm in conformal radiotherapy of lung cancer: re-evaluation of dose in normal lung tissue,”
*Radiotherapy and Oncology*, vol. 69, no. 1, pp. 1–10, 2003. View at Publisher · View at Google Scholar · View at Scopus - Z. Malik and C. Eswar, “Clinical audit of NSCLC radiotherapy outcomes at Clatterbridge Centre for Oncology,” unpublished.
- A. E. Nahum, J. Uzan, P. Jain, Z. I. Malik, J. D. Fenwick, and C. Baker, “Quantitative tumour control predictions for the radiotherapy of non-small-cell lung tumours,”
*Medical Physics*, vol. 38, 1, article 3641 pages, 2011. - Z. Malik, C. Eswar, J. Dobson, J. Fenwick, and A. E. Nahum, “Dose-individualisation for lung cancer radiotherapy—are we ready?”
*Lung Cancer*, vol. 57, no. 1, supplement, pp. S8–S9, 2007. - M. K. Martel, R. K. Ten Haken, M. B. Hazuka et al., “Estimation of tumor control probability model parameters from 3-D dose distributions of non-small cell lung cancer patients,”
*Lung Cancer*, vol. 24, no. 1, pp. 31–37, 1999. View at Publisher · View at Google Scholar · View at Scopus - M. Saunders, S. Dische, A. Barrett, A. Harvey, G. Griffiths, and M. Parmar, “Continuous, hyperfractionated, accelerated radiotherapy (CHART) versus conventional radiotherapy in non-small cell lung cancer: mature data from the randomised multicentre trial,”
*Radiotherapy and Oncology*, vol. 52, no. 2, pp. 137–148, 1999. View at Publisher · View at Google Scholar · View at Scopus - H. R. Withers, H. D. Thames, and L. J. Peters, “A new isoeffect curve for change in dose per fraction,”
*Radiotherapy and Oncology*, vol. 1, no. 2, pp. 187–191, 1983. View at Scopus - R. Calandrino, S. Broggi, G. M. Cattaneo, C. Fiorino, A. E. Nahum, and F. Fazio, “Some radiobiological considerations on the potential of IMRT in non-standard fractionation,”
*Radiotherapy & Oncology*, vol. 76, p. S23, 2005. - V. Panettieri, Z. I. Malik, C. V. Eswar et al., “Influence of dose calculation algorithms on isotoxic dose-escalation of non-small cell lung cancer radiotherapy,”
*Radiotherapy and Oncology*, vol. 97, no. 3, pp. 418–424, 2010. View at Publisher · View at Google Scholar · View at Scopus - J. Lester, L. Nixon, P. Mayles, et al., “The I-START Trial: ISoToxic accelerated radio therapy in locally advanced non-small cell lung cancer, 2012 The I-START Trial: ISoToxic accelerated radioTherapy in locally advanced non-small cell lung cancer,”
*Lung Cancer*, vol. 75, no. 1, supplement, p. S51, 2012. - H. D. Thames and J. H. Hendry,
*Fractionation in Radiotherapy*, Taylor & Francis, London, UK, 1987. - G. Steel, “Dose fractionation in radiotherapy, ch. 9,” in
*Handbook of Radiotherapy Physics Theory and Practice*, P. Mayles, A. Nahum, and J. C. Rosenwald, Eds., pp. 163–182, Taylor & Francis, London, UK, 2007. - M. C. Joiner and S. M. Bentzen, “Fractionation: the linear quadratic approach,” in
*Basic Clinical Radiobiology*, M. Joiner and A. van der Kogel, Eds., pp. 102–119, Hodder Arnold, 4th edition, 2009. - R. G. Dale, “The application of the linear-quadratic dose-effect equation to fractionated and protracted radiotherapy,”
*British Journal of Radiology*, vol. 58, no. 690, pp. 515–528, 1985. View at Scopus - J. F. Fowler, “21 Years of biologically effective dose,”
*British Journal of Radiology*, vol. 83, no. 991, pp. 554–568, 2010. View at Publisher · View at Google Scholar · View at Scopus - S. M. Bentzen and M. C. Joiner, “The linear quadratic approach in clinical practice,” in
*Basic Clinical Radiobiology*, M. Joiner and A. van der Kogel, Eds., pp. 120–134, Hodder Arnold, 4th edition, 2009. - A. E. Nahum and J. D. Chapman, “The interaction between tissue radiobiological properties (“architecture”), dose distribution and optimal fraction size—profound implications for conformal and heavy-particle radiation therapy,”
*International Journal of Radiation Oncology, Biology, Physics*, vol. 55, p. 446, 2003. - I. S. Vogelius, D. C. Westerly, G. M. Cannon, and S. M. Bentzen, “Hypofractionation does not increase radiation pneumonitis risk with modern conformal radiation delivery techniques,”
*Acta Oncologica*, vol. 49, no. 7, pp. 1052–1057, 2010. View at Publisher · View at Google Scholar · View at Scopus - J. Uzan and A. E. Nahum, “Radiobiologically guided optimisation of the prescription dose and fractionation scheme using BioSuite,”
*British Journal of Radiology*, vol. 85, pp. 1279–1286, 2012. - J. F. Fowler, W. A. Tomé, J. D. Fenwick, and M. P. Mehta, “A challenge to traditional radiation oncology,”
*International Journal of Radiation Oncology, Biology, Physics*, vol. 60, no. 4, pp. 1241–1256, 2004. View at Publisher · View at Google Scholar · View at Scopus - L. B. Marks, S. M. Bentzen, J. O. Deasy et al., “Radiation dose-volume effects in the lung,”
*International Journal of Radiation Oncology, Biology, Physics*, vol. 76, no. 3, pp. S70–S76, 2010. View at Publisher · View at Google Scholar · View at Scopus - I. Lax, H. Blomgren, I. Naslund, and R. Svanstrom, “Stereotactic radiotherapy of malignancies in the abdomen. Methodological aspects,”
*Acta Oncologica*, vol. 33, no. 6, pp. 677–683, 1994. View at Scopus - P. Baumann, J. Nyman, M. Hoyer et al., “Outcome in a prospective phase II trial of medically inoperable stage I non-small-cell lung cancer patients treated with stereotactic body radiotherapy,”
*Journal of Clinical Oncology*, vol. 27, no. 20, pp. 3290–3296, 2009. View at Publisher · View at Google Scholar · View at Scopus - B. M. Wennberg, P. Baumann, G. Gagliardi et al., “NTCP modelling of lung toxicity after SBRT comparing the universal survival curve and the linear quadratic model for fractionation correction,”
*Acta Oncologica*, vol. 50, no. 4, pp. 518–527, 2011. View at Publisher · View at Google Scholar · View at Scopus - M. Schwarz, M. Alber, J. V. Lebesque, B. J. Mijnheer, and E. M. F. Damen, “Dose heterogeneity in the target volume and intensity-modulated radiotherapy to escalate the dose in the treatment of non-small-cell lung cancer,”
*International Journal of Radiation Oncology, Biology, Physics*, vol. 62, no. 2, pp. 561–570, 2005. View at Publisher · View at Google Scholar · View at Scopus - M. Iori, “Methods for physical and radiobiological optimisation in radiotherapy with intensity modulation,”
*Physica Medica*, vol. 17, no. 2, pp. 55–73, 2001. View at Scopus - A. Brahme, “Individualizing cancer treatment: biological optimisation models in treatment and planning,”
*International Journal of Radiation Oncology, Biology, Physics*, vol. 49, pp. 327–337, 2001. - J. A. Peñagarícano, N. Papanikolaou, C. Wu, and Y. Yan, “An assessment of Biologically-based Optimization (BORT) in the IMRT era,”
*Medical Dosimetry*, vol. 30, no. 1, pp. 12–19, 2005. View at Publisher · View at Google Scholar · View at Scopus - A. L. Hoffmann, D. Den Hertog, A. Y. D. Siem, J. H. A. M. Kaanders, and H. Huizenga, “Convex reformulation of biologically-based multi-criteria intensity-modulated radiation therapy optimization including fractionation effects,”
*Physics in Medicine and Biology*, vol. 53, no. 22, pp. 6345–6362, 2008. View at Publisher · View at Google Scholar · View at Scopus - V. A. Semenenko, B. Reitz, E. Day, X. S. Qi, M. Miften, and X. A. Li, “Evaluation of a commercial biologically based IMRT treatment planning system,”
*Medical Physics*, vol. 35, no. 12, pp. 5851–5860, 2008. View at Publisher · View at Google Scholar · View at Scopus - J. Uzan, A. E. Nahum, P. Mayles, and I. Syndikus, “Radiobiologically-based inverse optimisation of IMRT plans for prostate cancer,”
*Radiotherapy & Oncology*, vol. 96, no. 1, supplement, p. S178, 2010. - M. G. Witte, J. Van Der Geer, C. Schneider, J. V. Lebesque, M. Alber, and M. Van Herk, “IMRT optimization including random and systematic geometric errors based on the expectation of TCP and NTCP,”
*Medical Physics*, vol. 34, no. 9, pp. 3544–3555, 2007. View at Publisher · View at Google Scholar · View at Scopus - M. Engelsman, P. Remeijer, M. Van Herk, J. V. Lebesque, B. J. Mijnheer, and E. M. F. Damen, “Field size reduction enables Iso-NTCP escalation of tumor control probability for irradiation of lung tumors,”
*International Journal of Radiation Oncology, Biology, Physics*, vol. 51, no. 5, pp. 1290–1298, 2001. View at Publisher · View at Google Scholar · View at Scopus - M. Baker, M. Nielsen, O. Hansen, J. W. Jahn, S. Korreman, and C. Brink, “Isotoxic dose escalation in the treatment of lung cancer by means of heterogeneous dose distributions in the presence of respiratory motion,”
*International Journal of Radiation Oncology, Biology, Physics*, vol. 81, pp. 849–555, 2011. View at Publisher · View at Google Scholar · View at Scopus - I. A. Popescu, M. Chadrasekaran, J. Uzan et al., “Radiobiological optimisation of 4D NSCL plans: small margins yield highest TCP for moving tumours,”
*Radiotherapy & Oncology*, vol. 96, no. 1, supplement, p. S178, 2010. - Y. Kim and W. A. Tomé, “Dose-painting IMRT optimization using biological parameters,”
*Acta Oncologica*, vol. 49, no. 8, pp. 1374–1384, 2010. View at Publisher · View at Google Scholar · View at Scopus - S. M. Bentzen and V. Gregoire, “Molecular imaging-based dose painting: a novel paradigm for radiation therapy prescription,”
*Seminars in Radiation Oncology*, vol. 21, no. 2, pp. 101–110, 2011. View at Publisher · View at Google Scholar · View at Scopus - Å. Søvik, E. Malinen, Ø. S. Bruland, S. M. Bentzen, and D. R. Olsen, “Optimization of tumour control probability in hypoxic tumours by radiation dose redistribution: a modelling study,”
*Physics in Medicine and Biology*, vol. 52, no. 2, pp. 499–513, 2007. View at Publisher · View at Google Scholar · View at Scopus - M. Iori, A. Botti, M. Paiusco et al., “18F-fluorocholine (F-CHO) PET-guided dose painting of prostate tumours using either TCP or EUD optimized to account for spatial clonogen redistribution,”
*Radiotherapy & Oncology*, vol. 96, no. 1, supplement, p. S125, 2010. - K. Otto, “Volumetric modulated arc therapy: IMRT in a single gantry arc,”
*Medical Physics*, vol. 35, no. 1, pp. 310–317, 2008. View at Publisher · View at Google Scholar · View at Scopus - D. P. Dearnaley, M. R. Sydes, J. D. Graham et al., “Escalated-dose versus standard-dose conformal radiotherapy in prostate cancer: first results from the MRC RT01 randomised controlled trial,”
*Lancet Oncology*, vol. 8, no. 6, pp. 475–487, 2007. View at Publisher · View at Google Scholar · View at Scopus - P. Lambin, S. F. Petit, H. J. W. L. Aerts et al., “The ESTRO Breur lecture 2009. from population to voxel-based radiotherapy: exploiting intra-tumour and intra-organ heterogeneity for advanced treatment of non-small cell lung cancer,”
*Radiotherapy and Oncology*, vol. 96, no. 2, pp. 145–152, 2010. View at Publisher · View at Google Scholar · View at Scopus - E. Rutkowska,
*Mechanistic Simulation of Normal-Tissue damage during Radiotherapy [Ph.D. thesis]*, University of Liverpool, 2010. - S. L. Tucker, M. Li, T. Xu, et al., “Incorporating single-nucleotide polymorphisms into the Lyman model to improve prediction of radiation pneumonitis,”
*International Journal of Radiation Oncology, Biology, Physics*. In press. - S. L. Tucker, H. H. Liu, Z. Liao et al., “Analysis of radiation pneumonitis risk using a generalized Lyman model,”
*International Journal of Radiation Oncology, Biology, Physics*, vol. 72, no. 2, pp. 568–574, 2008. View at Publisher · View at Google Scholar · View at Scopus - R. Valdagni, T. Rancati, M. Ghilotti et al., “To bleed or not to bleed. A prediction based on individual gene profiling combined with dose-volume histogram shapes in prostate cancer patients undergoing three-dimensional conformal radiation therapy,”
*International Journal of Radiation Oncology, Biology, Physics*, vol. 74, no. 5, pp. 1431–1440, 2009. View at Publisher · View at Google Scholar · View at Scopus - T. Rancati, C. Fiorino, G. Fellin et al., “Inclusion of clinical risk factors into NTCP modelling of late rectal toxicity after high dose radiotherapy for prostate cancer,”
*Radiotherapy and Oncology*, vol. 100, pp. 124–130, 2011. View at Publisher · View at Google Scholar · View at Scopus - C. M. L. West, R. M. Elliott, and N. G. Burnet, “The genomics revolution and radiotherapy,”
*Clinical Oncology*, vol. 19, no. 6, pp. 470–480, 2007. View at Publisher · View at Google Scholar · View at Scopus - X. Allen Li, M. Alber, and J. O. Deasy, “The use and QA of biologically related models for treatment planning: short report of the TG-166 of the therapy physics committee of the AAPM,”
*Medical Physics*, vol. 39, pp. 1386–1409, 2012. - M. Iori, G. M. Cattaneo, E. Cagni et al., “Dose-volume and biological-model based comparison between helical tomotherapy and (inverse-planned) IMAT for prostate tumours,”
*Radiotherapy and Oncology*, vol. 88, no. 1, pp. 34–45, 2008. View at Publisher · View at Google Scholar · View at Scopus - QUANTEC,
*International Journal of Radiation Oncology, Biology, Physics*, vol. 76, no. 3, supplement, 2010. - C. Fiorino, R. Valdagni, T. Rancati, and G. Sanguineti, “Dose-volume effects for normal tissues in external radiotherapy: pelvis,”
*Radiotherapy and Oncology*, vol. 93, no. 2, pp. 153–167, 2009. View at Publisher · View at Google Scholar · View at Scopus - G. Gagliardi, L. S. Constine, V. Moiseenko et al., “Radiation dose-volume effects in the heart,”
*International Journal of Radiation Oncology, Biology, Physics*, vol. 76, no. 3, pp. S77–S85, 2010. View at Publisher · View at Google Scholar · View at Scopus - J. D. Chapman, “Single-hit mechanism of tumour cell killing by radiation,”
*International Journal of Radiation Biology*, vol. 79, no. 2, pp. 71–81, 2003. View at Scopus - J. Z. Wang, Z. Huang, S. S. Lo, W. T. C. Yuh, and N. A. Mayr, “A generalized linear-quadratic model for radiosurgery, stereotactic body radiation therapy, and high-dose rate brachytherapy,”
*Science Translational Medicine*, vol. 2, no. 39, p. 39ra48, 2010. View at Publisher · View at Google Scholar · View at Scopus - M. Carlone, D. Wilkins, P. Raaphorst, M. Guerrero, and X. A. Li, “The modified linear-quadratic model of Guerrero and Li can be derived from a mechanistic basis and exhibits linear-quadratic-linear behaviour,”
*Physics in Medicine and Biology*, vol. 50, no. 10, pp. L9–L15, 2005. View at Publisher · View at Google Scholar · View at Scopus - J. P. Kirkpatrick, D. J. Brenner, and C. G. Orton, “The linear-quadratic model is inappropriate to model high dose per fraction effects in radiosurgery,”
*Medical Physics*, vol. 36, no. 8, pp. 3381–3384, 2009. View at Publisher · View at Google Scholar · View at Scopus - N. Tilly,
*Radiobiological investigations of proton and light ion therapy [Ph.D. thesis]*, University of Stockholm, 2002. - R. G. Dale, B. Jones, and A. Cárabe-Fernández, “Why more needs to be known about RBE effects in modern radiotherapy,”
*Applied Radiation and Isotopes*, vol. 67, no. 3, pp. 387–392, 2009. View at Publisher · View at Google Scholar · View at Scopus - A. Nahum, G. Gagliardi, and A. Kacperek, “How should we apply biological models to heavy charged-particle treatment plans?”
*Radiotherapy & Oncology*, vol. 96, no. 1, supplement, p. S537, 2010. - D. R. Wigg,
*Applied Radiobiology and Bioeffect Planning*, Medical Physics Publishing, Madison, Wis, USA, 2001. - R. Dale and D. Jones,
*Radiobiological Modelling in Radiation Oncology*, British Institute of Radiology, London, UK, 2007. - J. D. Chapman and C. J. Gillespie, “The power of radiation biophysics—let’s use it,”
*International Journal of Radiation Oncology, Biology, Physics*, vol. 84, pp. 309–311, 2012.