International Journal of Evolutionary Biology / 2011 / Article / Tab 1 / Review Article
Baculovirus: Molecular Insights on Their Diversity and Conservation Table 1 Baculovirus complete genomes.
Genus Name Abbreviation Code Accesion number Genome (bp) Annotated ORFs GC% Ref. Alphabaculovirus -Group IAntheraea pernyi NPV-ZAnpeNPV-Z APN NC_008035 126629 145 53.5 [27 ] Antheraea pernyi NPV-L2AnpeNPV-L2 AP2 EF207986 126246 144 53.5 [28 ] Anticarsia gemmatalis MNPV-2DAgMNPV-2D AGN NC_008520 132239 152 44.5 [29 ] Autographa californica MNPV-C6AcMNPV-C6 ACN NC_001623 133894 154 40.7 [30 ] Bombyx mori NPVBmNPV BMN NC_001962 128413 137 40.4 [31 ] Bombyx mandarina NPVBomaNPV BON NC_012672 126770 141 40.2 [32 ] Choristoneura fumiferana DEF MNPVCfDEFMNPV CDN NC_005137 131160 149 45.8 [33 ] Choristoneura fumiferana MNPVCfMNPV CFN NC_004778 129593 145 50.1 [34 ] Epiphyas postvittana NPVEppoNPV EPN NC_003083 118584 136 40.7 [35 ] Hyphantria cunea NPVHycuNPV HCN NC_007767 132959 148 45.5 [36 ] Maruca vitrata MNPVMaviMNPV MVN NC_008725 111953 126 38.6 [37 ] Orgyia pseudotsugata MNPVOpMNPV OPN NC_001875 131995 152 55.1 [38 ] Plutella xylostella MNPVPlxyMNPV PXN NC_008349 134417 149 40.7 U Rachiplusia ou MNPVRoMNPV RON NC_004323 131526 146 39.1 [39 ] Alphabaculovirus -Group IIAdoxophyes honmai NPVAdhoNPV AHN NC_004690 113220 125 35.6 [40 ] Adoxophyes orana NPVAdorNPV AON NC_011423 111724 121 35.0 [41 ] Agrotis ipsilon NPVAgipNPV AIN NC_011345 155122 163 48.6 U Agrotis segetum NPVAgseNPV ASN NC_007921 147544 153 45.7 [42 ] Apocheima cinerarium NPVApciNPV APO FJ914221 123876 118 33.4 U Chrysodeixis chalcites NPVChChNPV CCN NC_007151 149622 151 39.0 [43 ] Clanis bilineata NPVClbiNPV CBN NC_008293 135454 129 37.7 [44 ] Ectropis obliqua NPVEcobNPV EON NC_008586 131204 126 37.6 [45 ] Euproctis pseudoconspersa NPVEupsNPV EUN NC_012639 141291 139 40.4 [46 ] Helicoverpa armigera NPV-C1HearNPV-C1 HA1 NC_003094 130759 135 38.9 [47 ] Helicoverpa armigera NPV-G4HearNPV-G4 HA4 NC_002654 131405 135 39.0 [47 ] Helicoverpa armigera MNPVHearMNPV HAN NC_011615 154196 162 40.1 [48 ] Helicoverpa armigera SNPV-NNg1HearSNPV-NNg1 HAS NC_011354 132425 143 39.2 [49 ] Helicoverpa zea SNPVHzSNPV HZN NC_003349 130869 139 39.1 U Leucania separata NPV-AH1LeseNPV-AH1 LSN NC_008348 168041 169 48.6 [50 ] Lymantria dispar MNPVLdMNPV LDN NC_001973 161046 163 57.5 [51 ] Lymantria xylina MNPVLyxyMNPV LXN NC_013953 156344 157 53.5 [52 ] Mamestra configurata NPV-90-2MacoNPV-90-2 MCN NC_003529 155060 169 41.7 [53 ] Mamestra configurata NPV-90-4MacoNPV-90-4 MC4 AF539999 153656 168 41.7 [54 ] Mamestra configurata NPV-BMacoNPV-B MCB NC_004117 158482 169 40.0 [55 ] Orgyia leucostigma NPVOrleNPV OLN NC_010276 156179 135 39.9 U Spodoptera exigua MNPVSeMNPV SEN NC_002169 135611 142 43.8 U Spodoptera frugiperda MNPV-3AP2SfMNPV-3AP2 SF2 NC_009011 131330 143 40.2 [56 ] Spodoptera frugiperda MNPV-19SfMNPV-19 SF9 EU258200 132565 141 40.3 [57 ] Spodoptera litura NPV-IISpliNPV-II SLN NC_011616 148634 147 45.0 U Spodoptera litura NPV-G2SpliNPV-G2 SL2 NC_003102 139342 141 42.8 [58 ] Trichoplusia ni SNPVTnSNPV TNN NC_007383 134394 144 39.0 [59 ] Betabaculovirus Adoxophyes orana GVAdorGV AOG NC_005038 99657 119 34.5 [60 ] Agrotis segetum GVAgseGV ASG NC_005839 131680 132 37.3 U Choristoneura occidentalis GVChocGV COG NC_008168 104710 116 32.7 [61 ] Cryptophlebia leucotreta GVCrleGV CLG NC_005068 110907 129 32.4 [62 ] Cydia pomonella GVCpGV CPG NC_002816 123500 143 45.3 [63 ] Helicoverpa armigera GVHearGV HAG NC_010240 169794 179 40.8 [64 ] Phthorimea operculella GVPhopGV POG NC_004062 119217 130 35.7 [65 ] Plutella xylostella GVPlxyGV PXG NC_002593 100999 120 40.7 [66 ] Pieris rapae GVPiraGV PRG GQ884143 108592 120 33.2 U Pseudaletia unipuncta GV-HawaiinPsunGV PUG EU678671 176677 183 39.8 U Spodoptera litura GV-K1SpliGV SLG NC_009503 124121 136 38.8 [67 ] Xestia c-nigrum GVXnGV XCG NC_002331 178733 181 40.7 [68 ] Gamma Neodiprion abietis NPVNeabNPV NAN NC_008252 84264 93 33.4 [69 ] Neodiprion lecontei NPVNeleNPV NLN NC_005906 81755 93 33.3 [70 , 71 ] Neodiprion sertifer NPVNeseNPV NSN NC_005905 86462 90 33.8 [71 , 72 ] Delta Culex nigripalpus NPVCuniNPV CNN NC_003084 108252 109 50.9 [73 ]
This table contains all of baculoviruses used in bioinformatic studies, sorted by genus (and within them by alphabetical order). MNPV is the abbreviation of multicapsid nucleopolyhedrovirus; NPV is the abbreviation of nucleopolyhedrovirus; SNPV is the abbreviation of single nucleopolyhedrovirus; GV is the abbreviation of granulovirus. The accession numbers are from National Center for Biotechnology Information (NCBI, http://www.ncbi.nlm.nih.gov/ ) and correspond to the sequences of complete genomes. Code is an acronym used for practicality. U: unpublished.